RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SCG3Q8WXD2 468 aaKnown RBP7.97□□□□□ -1.13
SSBP3-211ENST00000528787 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.97□□□□□ -1.13
SSBP3-211ENST00000528787 PKNOX2Q96KN3 472 aa7.97□□□□□ -1.13
SSBP3-211ENST00000528787 MCCC1Q96RQ3 725 aaPredicted RBP7.97□□□□□ -1.13
SSBP3-211ENST00000528787 RANBP9Q96S59 729 aa7.97□□□□□ -1.13
SSBP3-211ENST00000528787 CEP41Q9BYV8 373 aa7.97□□□□□ -1.13
SSBP3-211ENST00000528787 GPR63Q9BZJ6 419 aa7.97□□□□□ -1.13
SSBP3-211ENST00000528787 MKRN2Q9H000 416 aaKnown RBP7.97□□□□□ -1.13
SSBP3-211ENST00000528787 ZFYVE1Q9HBF4 777 aa7.97□□□□□ -1.13
SSBP3-211ENST00000528787 SUSD2Q9UGT4 822 aa7.97□□□□□ -1.13
SSBP3-211ENST00000528787 APPL1Q9UKG1 709 aa7.97□□□□□ -1.13
SSBP3-211ENST00000528787 TTC28Q96AY4 2481 aa7.97□□□□□ -1.13
SSBP3-211ENST00000528787 TBC1D3DA0A087WVF3 549 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TBC1D3IA0A087WXS9 549 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TBC1D3EA0A087X179 549 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TBC1D3KA0A087X1G2 549 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 C1orf232A0A0U1RR37 186 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 A0A1W2PP55 124 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TBC1D3FA6NER0 549 aaPredicted RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TBC1D3LB9A6J9 549 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 RIOK3O14730 519 aaKnown RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 MUSKO15146 869 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 FANCGO15287 622 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 RAD51CO43502 376 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 LZTS3O60299 673 aaPredicted RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 FOXD2O60548 495 aaPredicted RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 RPP40O75818 363 aaKnown RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 SEC31AO94979 1220 aaKnown RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 PCDH8O95206 1070 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 PIGNO95427 931 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 METTL18O95568 372 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 MT-CYBP00156 380 aaPredicted RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 POLBP06746 335 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 MMP2P08253 660 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 GSTA2P09210 222 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TBC1D3HP0C7X1 549 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 LPOP22079 712 aaPredicted RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 KELP23276 732 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 ADRA1DP25100 572 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 HMGCLP35914 325 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 P2RY2P41231 377 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 PTGIRP43119 386 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 VPS41P49754 854 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 ADPRHP54922 357 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 CSTF1Q05048 431 aaKnown RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 NIPAL4Q0D2K0 466 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 CNTN1Q12860 1018 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 OVGP1Q12889 678 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TRAF2Q12933 501 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 PEX6Q13608 980 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 ITGA9Q13797 1035 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 KCNJ11Q14654 390 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 SLMAPQ14BN4 828 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TAF1AQ15573 450 aaPredicted RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 HIF1AQ16665 826 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 ZNF284Q2VY69 593 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TMEM52BQ4KMG9 183 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 PCID2Q5JVF3 399 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TBC1D3GQ6DHY5 549 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TBC1D3CQ6IPX1 549 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 KDELC1Q6UW63 502 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 ZNF765Q7L2R6 523 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 CYP2U1Q7Z449 544 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 GLT6D1Q7Z4J2 308 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TBC1D3Q8IZP1 549 aaPredicted RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 CBARPQ8N350 705 aaPredicted RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 NETO2Q8NC67 525 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 CHST14Q8NCH0 376 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 OR6K2Q8NGY2 324 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 SPATA22Q8NHS9 363 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 CALML6Q8TD86 181 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 GAB3Q8WWW8 586 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 FAM131CQ96AQ9 280 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 MRGPRX2Q96LB1 330 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TTC25Q96NG3 672 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 HHIPQ96QV1 700 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 FICDQ9BVA6 458 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 MRM3Q9HC36 420 aaKnown RBP7.96□□□□□ -1.14
SSBP3-211ENST00000528787 HCN2Q9UL51 889 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 CHKBQ9Y259 395 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 VPS9D1Q9Y2B5 631 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 HCN4Q9Y3Q4 1203 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 NEU2Q9Y3R4 380 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 TRPM6Q9BX84 2022 aa7.96□□□□□ -1.14
SSBP3-211ENST00000528787 GOLGA8CPA6NN73 597 aa7.95□□□□□ -1.14
SSBP3-211ENST00000528787 MEI4A8MW99 385 aa7.95□□□□□ -1.14
SSBP3-211ENST00000528787 PRAMEF26H0Y7S4 382 aa7.95□□□□□ -1.14
SSBP3-211ENST00000528787 K7ESF4 209 aa7.95□□□□□ -1.14
SSBP3-211ENST00000528787 WNT9AO14904 365 aa7.95□□□□□ -1.14
SSBP3-211ENST00000528787 AREL1O15033 823 aa7.95□□□□□ -1.14
SSBP3-211ENST00000528787 STX7O15400 261 aaKnown RBP7.95□□□□□ -1.14
SSBP3-211ENST00000528787 ERLIN1O75477 346 aa7.95□□□□□ -1.14
SSBP3-211ENST00000528787 CTSLP07711 333 aa7.95□□□□□ -1.14
SSBP3-211ENST00000528787 CHRM1P11229 460 aaPredicted RBP7.95□□□□□ -1.14
SSBP3-211ENST00000528787 RALBP11234 206 aa7.95□□□□□ -1.14
SSBP3-211ENST00000528787 TIMP2P16035 220 aa7.95□□□□□ -1.14
SSBP3-211ENST00000528787 TSHRP16473 764 aa7.95□□□□□ -1.14
SSBP3-211ENST00000528787 COL9A1P20849 921 aa7.95□□□□□ -1.14
SSBP3-211ENST00000528787 HTR1BP28222 390 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms