RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	YPEL5	P62699	121 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	POLR2L	P62875	67 aa	Known RBP	11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	DSC2	Q02487	901 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	PTPRR	Q15256	657 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	SMAD1	Q15797	465 aa	Known RBP	11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	SLC9A4	Q6AI14	798 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	MACC1	Q6ZN28	852 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	MARCH9	Q86YJ5	346 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	RHOT1	Q8IXI2	618 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	RBFA	Q8N0V3	343 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	PLA2G15	Q8NCC3	412 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	HDAC11	Q96DB2	347 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	SEMA3C	Q99985	751 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	POLR1E	Q9GZS1	481 aa	Known RBP	11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	TCEAL2	Q9H3H9	227 aa	Predicted RBP	11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	GOLPH3	Q9H4A6	298 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	RBM22	Q9NW64	420 aa	Known RBP eCLIP	11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	NLGN3	Q9NZ94	848 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	PCDHA13	Q9Y5I0	950 aa		11.81	□□□□□ -0.52
PSMC3-205	ENST00000528362	ZZEF1	O43149	2961 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362		A0A1W2PQ67	120 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	RCCD1	A6NED2	376 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362		H3BM21	787 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362		K7ESM1	405 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	AQP9	O43315	295 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	SPOP	O43791	374 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	HEXIM1	O94992	359 aa	Known RBP	11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	HLA-DQB2	P05538	268 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	TNNT1	P13805	278 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	CCNB1	P14635	433 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	LHCGR	P22888	699 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	VIPR1	P32241	457 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	CYLC1	P35663	651 aa	Predicted RBP	11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	NOP2	P46087	812 aa	Known RBP	11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	CLDN6	P56747	220 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	PPID	Q08752	370 aa	Known RBP	11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	NIPAL4	Q0D2K0	466 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	MTM1	Q13496	603 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	PTK2B	Q14289	1009 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	INPP5A	Q14642	412 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	NFATC4	Q14934	902 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	SPA17	Q15506	151 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	CNGA3	Q16281	694 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	MFSD7	Q6UXD7	560 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	CCDC13	Q8IYE1	715 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	PHACTR4	Q8IZ21	702 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	PELI3	Q8N2H9	469 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	CCNY	Q8ND76	341 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	ARRDC2	Q8TBH0	407 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	PIH1D2	Q8WWB5	315 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	RNF25	Q96BH1	459 aa	Predicted RBP	11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	COQ10A	Q96MF6	247 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	ZNF830	Q96NB3	372 aa	Predicted RBP	11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	MCCC1	Q96RQ3	725 aa	Predicted RBP	11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	LGMN	Q99538	433 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	DDX56	Q9NY93	547 aa	Known RBP	11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	AMACR	Q9UHK6	382 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	SALL4	Q9UJQ4	1053 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	REXO2	Q9Y3B8	237 aa	Known RBP	11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	TTLL3	Q9Y4R7	772 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	OR1A2	Q9Y585	309 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	HEY1	Q9Y5J3	304 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	RAI2	Q9Y5P3	530 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	ALG6	Q9Y672	507 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362	WDFY3	Q8IZQ1	3526 aa		11.8	□□□□□ -0.52
PSMC3-205	ENST00000528362		A0A0A6YYK5	440 aa	Predicted RBP	11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	LY6G6E	A0A0G2JKS1	128 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	FAM149A	A5PLN7	773 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	NEMP2	A6NFY4	417 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	KCNK1	O00180	336 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	APOL1	O14791	398 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	PSTPIP1	O43586	416 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	FZD6	O60353	706 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	GCAT	O75600	419 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	NDUFA10	O95299	355 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	PDHA1	P08559	390 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	C1S	P09871	688 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	ALPPL2	P10696	532 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	MYF5	P13349	255 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	ACP1	P24666	158 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	CDKN2B	P42772	138 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	MARCKSL1	P49006	195 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	PEX5	P50542	639 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	ITK	Q08881	620 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	ZBTB17	Q13105	803 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	TAZ	Q16635	292 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	ALG11	Q2TAA5	492 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	FAM182A	Q5T1J6	154 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	ARMC12	Q5T9G4	340 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	KCTD16	Q68DU8	428 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	C11orf63	Q6NUN7	778 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	NPNT	Q6UXI9	565 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	RAD9B	Q6WBX8	426 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	NYAP1	Q6ZVC0	841 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	USP45	Q70EL2	814 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	TSPAN33	Q86UF1	283 aa		11.79	□□□□□ -0.52
PSMC3-205	ENST00000528362	RFX6	Q8HWS3	928 aa		11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms