RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	UBA2	Q9UBT2	640 aa	Predicted RBP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	TMCO1	Q9UM00	188 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216		A0A1B0GVM2	712 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	TCAF2	A6NFQ2	919 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	TBKBP1	A7MCY6	615 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	IPO13	O94829	963 aa	Known RBP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	VNN2	O95498	520 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	S1PR4	O95977	384 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	SAT1	P21673	171 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	CHRNA4	P43681	627 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	CCL23	P55773	120 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	OXCT1	P55809	520 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	USP4	Q13107	963 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	RTP2	Q5QGT7	225 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	HECTD2	Q5U5R9	776 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	C1orf146	Q5VVC0	180 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	NADSYN1	Q6IA69	706 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	HERC6	Q8IVU3	1022 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	RNF168	Q8IYW5	571 aa	Predicted RBP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	TTC9B	Q8N6N2	239 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	OR6P1	Q8NGX9	317 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	CEP70	Q8NHQ1	597 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	HEXDC	Q8WVB3	486 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	DNAJC9	Q8WXX5	260 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	USP13	Q92995	863 aa	Predicted RBP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	L3HYPDH	Q96EM0	354 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	MAEL	Q96JY0	434 aa	Known RBP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	CINP	Q9BW66	212 aa	Predicted RBP	10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	NACA2	Q9H009	215 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	HIPK3	Q9H422	1215 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	SYTL2	Q9HCH5	934 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	SLC7A8	Q9UHI5	535 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	SSX2IP	Q9Y2D8	614 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216	SLC27A5	Q9Y2P5	690 aa		10.26	□□□□□ -0.77
PGAP2-231	ENST00000528216		A0A088AWK7	358 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	ZNF840P	A6NDX5	716 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	MAP3K7	O43318	606 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	GRID2	O43424	1007 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	DCX	O43602	365 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	SMIM24	O75264	130 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	TBX18	O95935	607 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	FDXR	P22570	491 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	MPST	P25325	297 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	HOXD9	P28356	352 aa	Predicted RBP	10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	ABCG1	P45844	678 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	CPA2	P48052	419 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	INHBC	P55103	352 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	XIAP	P98170	497 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	ZNF177	Q13360	481 aa	Predicted RBP	10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	GPNMB	Q14956	572 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	VEPH1	Q14D04	833 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	TYSND1	Q2T9J0	566 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	MUM1	Q2TAK8	710 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	CNST	Q6PJW8	725 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	AFTPH	Q6ULP2	937 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	LRRC74B	Q6ZQY2	392 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	RIPOR1	Q6ZS17	1223 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	TRIM67	Q6ZTA4	783 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	MFSD6L	Q8IWD5	586 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	PGBD5	Q8N414	524 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	RHEBL1	Q8TAI7	183 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	WDR60	Q8WVS4	1066 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	HDAC10	Q969S8	669 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	ZNF512	Q96ME7	567 aa	Predicted RBP	10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	KLHL5	Q96PQ7	755 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	TRIB3	Q96RU7	358 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	ZNF385D	Q9H6B1	395 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	CCSER2	Q9H7U1	834 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	NLE1	Q9NVX2	485 aa	Predicted RBP	10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	STOML2	Q9UJZ1	356 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	TBX21	Q9UL17	535 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	TBC1D30	Q9Y2I9	924 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	LRCH1	Q9Y2L9	728 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	COMMD10	Q9Y6G5	202 aa		10.25	□□□□□ -0.77
PGAP2-231	ENST00000528216	CXorf51A	A0A1B0GTR3	108 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	KIAA0355	O15063	1070 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	CD3EAP	O15446	510 aa	Known RBP	10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	ABLIM3	O94929	683 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	TIMP1	P01033	207 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	CCDC166	P0CW27	439 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	ATF6	P18850	670 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	IMPDH1	P20839	514 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	ITGB8	P26012	769 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	PIK3R1	P27986	724 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	RFC2	P35250	354 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	AVPR1A	P37288	418 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	ALDH1A3	P47895	512 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	GLRB	P48167	497 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	ATP4B	P51164	291 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	CLNS1A	P54105	237 aa	Known RBP	10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	MAX	P61244	160 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	DLG1	Q12959	904 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	CYLC2	Q14093	348 aa	Predicted RBP	10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	TAF1A	Q15573	450 aa	Predicted RBP	10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	SMAD1	Q15797	465 aa	Known RBP	10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	SLC9B1	Q4ZJI4	515 aa		10.24	□□□□□ -0.77
PGAP2-231	ENST00000528216	ADGRF1	Q5T601	910 aa		10.24	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms