RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 CES1P23141 567 aa33.19■■■□□ 2.9
SSSCA1-205ENST00000527920 HADHBP55084 474 aaKnown RBP33.19■■■□□ 2.9
SSSCA1-205ENST00000527920 MAXP61244 160 aa33.19■■■□□ 2.9
SSSCA1-205ENST00000527920 CCDC170Q8IYT3 715 aa33.19■■■□□ 2.9
SSSCA1-205ENST00000527920 HDAC11Q96DB2 347 aa33.19■■■□□ 2.9
SSSCA1-205ENST00000527920 NT5MQ9NPB1 228 aa33.19■■■□□ 2.9
SSSCA1-205ENST00000527920 B4GALT6Q9UBX8 382 aa33.19■■■□□ 2.9
SSSCA1-205ENST00000527920 PHTF1Q9UMS5 762 aa33.19■■■□□ 2.9
SSSCA1-205ENST00000527920 ANKRD36A6QL64 1941 aa33.18■■■□□ 2.9
SSSCA1-205ENST00000527920 K7ESM1 405 aa33.18■■■□□ 2.9
SSSCA1-205ENST00000527920 AQP9O43315 295 aa33.18■■■□□ 2.9
SSSCA1-205ENST00000527920 RECQL5O94762 991 aaPredicted RBP33.18■■■□□ 2.9
SSSCA1-205ENST00000527920 CKMT1AP12532 417 aa33.18■■■□□ 2.9
SSSCA1-205ENST00000527920 GBE1Q04446 702 aa33.18■■■□□ 2.9
SSSCA1-205ENST00000527920 TRAF2Q12933 501 aa33.18■■■□□ 2.9
SSSCA1-205ENST00000527920 PHACTR4Q8IZ21 702 aa33.18■■■□□ 2.9
SSSCA1-205ENST00000527920 ZCCHC14Q8WYQ9 949 aaKnown RBP33.18■■■□□ 2.9
SSSCA1-205ENST00000527920 DTLQ9NZJ0 730 aa33.18■■■□□ 2.9
SSSCA1-205ENST00000527920 SPASTQ9UBP0 616 aa33.18■■■□□ 2.9
SSSCA1-205ENST00000527920 C3orf70A6NLC5 250 aaPredicted RBP33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 TPP1O14773 563 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 PGLSO95336 258 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 CAPNS1P04632 268 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 HTR1BP28222 390 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 ZNF75DP51815 510 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 SEMG2Q02383 582 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 INPP5AQ14642 412 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 ZNF830Q96NB3 372 aaPredicted RBP33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 APOOQ9BUR5 198 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 RBSNQ9H1K0 784 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 CAAP1Q9H8G2 361 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 EVA1BQ9NVM1 165 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 KCTD5Q9NXV2 234 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 NCKIPSDQ9NZQ3 722 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 APOBEC3BQ9UH17 382 aaKnown RBP33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 PPIL1Q9Y3C6 166 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 KNTC1P50748 2209 aa33.17■■■□□ 2.9
SSSCA1-205ENST00000527920 HNF1BP35680 557 aa33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 BLKP51451 505 aa33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 DAB2P98082 770 aa33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 NFATC4Q14934 902 aa33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 ARMC12Q5T9G4 340 aa33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 SLC9A4Q6AI14 798 aa33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 ZCCHC8Q6NZY4 707 aaKnown RBP33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 RHOT1Q8IXI2 618 aa33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 ATL2Q8NHH9 583 aa33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 PDCD6IPQ8WUM4 868 aaKnown RBP33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 MCCC1Q96RQ3 725 aaPredicted RBP33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 SEMA3CQ99985 751 aa33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 SLC13A1Q9BZW2 595 aa33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 DDX56Q9NY93 547 aaKnown RBP33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 ZMIZ1Q9ULJ6 1067 aa33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 PNMA8BQ9ULN7 279 aaPredicted RBP33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 PLXNB3Q9ULL4 1909 aa33.16■■■□□ 2.9
SSSCA1-205ENST00000527920 CCNB1P14635 433 aa33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 GM2AP17900 193 aa33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 VIPR1P32241 457 aa33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 MAGEA1P43355 309 aa33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 E2F1Q01094 437 aa33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 PPARDQ03181 441 aa33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 SLC10A2Q12908 348 aaPredicted RBP33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 LRRK1Q38SD2 2015 aa33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 CACTIN-AS1Q8N1I8 211 aa33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 PLD5Q8N7P1 536 aa33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 SCRN2Q96FV2 425 aa33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 APOLD1Q96LR9 279 aa33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 PANX2Q96RD6 677 aa33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 RBM22Q9NW64 420 aaKnown RBP eCLIP33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 RAI2Q9Y5P3 530 aa33.15■■■□□ 2.9
SSSCA1-205ENST00000527920 GOLGA4Q13439 2230 aaKnown RBP33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 NEBLO76041 1014 aa33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 MAP3K6O95382 1288 aa33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 PCCBP05166 539 aa33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 HOXC4P09017 264 aaPredicted RBP33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 CYP2A6P11509 494 aaPredicted RBP33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 DUSP3P51452 185 aaPredicted RBP33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 CAMK2BQ13554 666 aa33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 USP45Q70EL2 814 aa33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 RBFAQ8N0V3 343 aa33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 CBARPQ8N350 705 aaPredicted RBP33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 LMX1AQ8TE12 382 aa33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 COQ10AQ96MF6 247 aa33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 LRRC61Q9BV99 259 aa33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 LUC7LQ9NQ29 371 aaKnown RBP33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 SALL4Q9UJQ4 1053 aa33.14■■■□□ 2.9
SSSCA1-205ENST00000527920 TDRD6O60522 2096 aaKnown RBP33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 SHROOM3Q8TF72 1996 aa33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 LMO7DNF2Z398 122 aa33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 PSMD11O00231 422 aa33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 FZD6O60353 706 aa33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 HEXIM1O94992 359 aaKnown RBP33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 GP1BAP07359 652 aa33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 ZFXP17010 805 aaPredicted RBP33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 TRIM23P36406 574 aa33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 KIAA1024LP59773 190 aa33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 CNGA3Q16281 694 aa33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 PRRT3Q5FWE3 981 aa33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 ESRP1Q6NXG1 681 aaKnown RBP33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 CCDC13Q8IYE1 715 aa33.13■■■□□ 2.89
SSSCA1-205ENST00000527920 TRAF3IP1Q8TDR0 691 aaPredicted RBP33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms