RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 DCPSQ96C86 337 aaKnown RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 CDCA5Q96FF9 252 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 DUS3LQ96G46 650 aaKnown RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 CCDC120Q96HB5 630 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 KAZALD1Q96I82 304 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 C9orf72Q96LT7 481 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 GLT1D1Q96MS3 346 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 UHRF1Q96T88 793 aaPredicted RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 C9orf16Q9BUW7 83 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 SSBP4Q9BWG4 385 aaPredicted RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 NAA50Q9GZZ1 169 aaKnown RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 GHITMQ9H3K2 345 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 COQ10BQ9H8M1 238 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 SPC25Q9HBM1 224 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 MRM3Q9HC36 420 aaKnown RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 SAYSD1Q9NPB0 183 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 SLC35C2Q9NQQ7 365 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ASNSD1Q9NWL6 643 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 DNAJC28Q9NX36 388 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ING3Q9NXR8 418 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 SLC17A7Q9P2U7 560 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ARPP21Q9UBL0 812 aaPredicted RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 GABBR1Q9UBS5 961 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 DPP7Q9UHL4 492 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 GLS2Q9UI32 602 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 TEKT2Q9UIF3 430 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 TLR6Q9Y2C9 796 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 MAP3K2Q9Y2U5 619 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ALG6Q9Y672 507 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 KCNMB2Q9Y691 235 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 LAMB4A4D0S4 1761 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ANKRD36CQ5JPF3 1778 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 KDM3BQ7LBC6 1761 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 LMO7Q8WWI1 1683 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 A0A0X1KG70 313 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 A0A1W2PPM1 405 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 C2orf71A6NGG8 1288 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 HMX3A6NHT5 357 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 TSPAN4O14817 238 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 PLD2O14939 933 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 ANGPT2O15123 496 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 DFNA5O60443 496 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 PLA2G6O60733 806 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 KCNK2O95069 426 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 CCNE2O96020 404 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 GOT2P00505 430 aaKnown RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 GH2P01242 217 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 SLC4A1P02730 911 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 MT-ND3P03897 115 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 JUNP05412 331 aaKnown RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 FCER1AP12319 257 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 SLC5A1P13866 664 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 UCHL3P15374 230 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 CYP11B1P15538 503 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 NPR1P16066 1061 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 TCN1P20061 433 aaPredicted RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 CYP2A7P20853 494 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 FBLN1P23142 703 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 ME2P23368 584 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 GLDCP23378 1020 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 CALML3P27482 149 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 ARNTP27540 789 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 MCM7P33993 719 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 RFC4P35249 363 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 RECQLP46063 649 aaPredicted RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 HTR3AP46098 478 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 RFX5P48382 616 aaPredicted RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 ARHGDIAP52565 204 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 MAPK12P53778 367 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 MLLT10P55197 1068 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 OR2B6P58173 313 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 EVA1CP58658 441 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 TEKQ02763 1124 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 INCA1Q0VD86 236 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 PDIA2Q13087 525 aaKnown RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 ORC1Q13415 861 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 BFSP2Q13515 415 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 MORF4L2Q15014 288 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 ZNF124Q15973 351 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 CCDC142Q17RM4 750 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 NHSL2Q5HYW2 709 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 CCNYL2Q5T2Q4 361 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 INTS11Q5TA45 600 aaKnown RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 CYP4F22Q6NT55 531 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 BBS12Q6ZW61 710 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 ARCQ7LC44 396 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 PRSS48Q7RTY5 328 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 PRSS42Q7Z5A4 293 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 VN1R5Q7Z5H4 357 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 DGKHQ86XP1 1220 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 ZC3H3Q8IXZ2 948 aaKnown RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 CCDC36Q8IYA8 594 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 UBQLNLQ8IYU4 475 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 CPA6Q8N4T0 437 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 IL22RA1Q8N6P7 574 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 C4orf32Q8N8J7 132 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 POC5Q8NA72 575 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 IL17RDQ8NFM7 739 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 RHOXF1Q8NHV9 184 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms