RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 TDRKHQ9Y2W6 561 aaKnown RBP12.58□□□□□ -0.4
CAPN1-208ENST00000527323 SQORQ9Y6N5 450 aa12.58□□□□□ -0.4
CAPN1-208ENST00000527323 AP3B1O00203 1094 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 NRP2O60462 931 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 CD4P01730 458 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 NUP107P57740 925 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 PRKCQQ04759 706 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 TRAP1Q12931 704 aaKnown RBP12.57□□□□□ -0.4
CAPN1-208ENST00000527323 ZNF470Q6ECI4 717 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 CTU1Q7Z7A3 348 aaKnown RBP12.57□□□□□ -0.4
CAPN1-208ENST00000527323 MFSD6LQ8IWD5 586 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 EDEM1Q92611 657 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 NT5C3BQ969T7 300 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 MAELQ96JY0 434 aaKnown RBP12.57□□□□□ -0.4
CAPN1-208ENST00000527323 GPR78Q96P69 363 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 VAT1Q99536 393 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 PAAF1Q9BRP4 392 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 MCMBPQ9BTE3 642 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 WDCPQ9H6R7 721 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 OR12D3Q9UGF7 316 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 SLC2A6Q9UGQ3 507 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 MRPL42Q9Y6G3 142 aaKnown RBP12.57□□□□□ -0.4
CAPN1-208ENST00000527323 YJEFN3A6XGL0 299 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 ETFBP38117 255 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 ENTPD1P49961 510 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 GJA9P57773 515 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 C1QTNF8P60827 252 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 STX1BP61266 288 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 FAM83EQ2M2I3 478 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 HMBOX1Q6NT76 420 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 CUZD1Q86UP6 607 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 LINC01465Q8N7H1 131 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 PPHLN1Q8NEY8 458 aaKnown RBP12.57□□□□□ -0.4
CAPN1-208ENST00000527323 HDAC11Q96DB2 347 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 TBL1YQ9BQ87 522 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 SLC25A23Q9BV35 468 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 FICDQ9BVA6 458 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 BRD8Q9H0E9 1235 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 ST3GAL5Q9UNP4 418 aa12.57□□□□□ -0.4
CAPN1-208ENST00000527323 A0A087WXM4 84 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 SMIM28A0A1B0GU29 152 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 FAM149AA5PLN7 773 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 I6L893 689 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-208ENST00000527323 SOCS2O14508 198 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 PMPCBO75439 489 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 ZNF189O75820 626 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-208ENST00000527323 POMCP01189 267 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 CD151P48509 253 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 KIF19Q2TAC6 998 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 OSTM1Q86WC4 334 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 PELI3Q8N2H9 469 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 FIBCD1Q8N539 461 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 RIN3Q8TB24 985 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 TOP1MTQ969P6 601 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 FAR2Q96K12 515 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 HNRNPABQ99729 332 aaKnown RBP12.56□□□□□ -0.4
CAPN1-208ENST00000527323 MTG1Q9BT17 334 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-208ENST00000527323 SIK2Q9H0K1 926 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 OSBPL2Q9H1P3 480 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 PLGRKTQ9HBL7 147 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 SFMBT1Q9UHJ3 866 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 FBXW11Q9UKB1 542 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 AAR2Q9Y312 384 aaKnown RBP12.56□□□□□ -0.4
CAPN1-208ENST00000527323 RAD54BQ9Y620 910 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 NUP205Q92621 2012 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 GIPC1O14908 333 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 TRIM24O15164 1050 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 PSMD3O43242 534 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 FOXD2O60548 495 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-208ENST00000527323 FKTNO75072 461 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 USP17L7P0C7H9 530 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 DARSP14868 501 aaKnown RBP12.56□□□□□ -0.4
CAPN1-208ENST00000527323 SLC1A2P43004 574 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 ACLYP53396 1101 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 CREB5Q02930 508 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 GEN1Q17RS7 908 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 TBCELQ5QJ74 424 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 FAM219BQ5XKK7 198 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 CLEC6AQ6EIG7 209 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 NOTUMQ6P988 496 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 ZNF554Q86TJ5 538 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 CBR4Q8N4T8 237 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 TCF12Q99081 682 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 TKTL2Q9H0I9 626 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 ARHGEF38Q9NXL2 777 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 HCSTQ9UBK5 93 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 EBF1Q9UH73 591 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 TCRBV3S1A0A5B6 114 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 PIRO00625 290 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 IMPDH2P12268 514 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 KCNA5P22460 613 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 YWHAQP27348 245 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 CCL23P55773 120 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 GALNT2Q10471 571 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 HMGCLL1Q8TB92 370 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 FNDC8Q8TC99 324 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 HM13Q8TCT9 377 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 CYGBQ8WWM9 190 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 THAP11Q96EK4 314 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 SCLYQ96I15 445 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms