RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 Q6ZVU0 165 aa18.91■□□□□ 0.62
SMPD1-203ENST00000527275 MICALCLQ6ZW33 695 aa18.91■□□□□ 0.62
SMPD1-203ENST00000527275 MARK2Q7KZI7 788 aaKnown RBP18.91■□□□□ 0.62
SMPD1-203ENST00000527275 TMEM135Q86UB9 458 aa18.91■□□□□ 0.62
SMPD1-203ENST00000527275 RALGPS2Q86X27 583 aaPredicted RBP18.91■□□□□ 0.62
SMPD1-203ENST00000527275 CACNA2D3Q8IZS8 1091 aa18.91■□□□□ 0.62
SMPD1-203ENST00000527275 ZNF366Q8N895 744 aa18.91■□□□□ 0.62
SMPD1-203ENST00000527275 OR2AP1Q8NGE2 309 aa18.91■□□□□ 0.62
SMPD1-203ENST00000527275 ISG20Q96AZ6 181 aaKnown RBP18.91■□□□□ 0.62
SMPD1-203ENST00000527275 ZDHHC4Q9NPG8 344 aa18.91■□□□□ 0.62
SMPD1-203ENST00000527275 COL4A2P08572 1712 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 TM9SF1O15321 606 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 TAC1P20366 129 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 WNT3AP56704 352 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 PFKPQ01813 784 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 MGAT5Q09328 741 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 BMPR2Q13873 1038 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 KDELC1Q6UW63 502 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 FRS2Q8WU20 508 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 ZNF669Q96BR6 464 aaPredicted RBP18.9■□□□□ 0.62
SMPD1-203ENST00000527275 ELAC2Q9BQ52 826 aaKnown RBP18.9■□□□□ 0.62
SMPD1-203ENST00000527275 TBL1YQ9BQ87 522 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 FSD1LQ9BXM9 530 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 CEP44Q9C0F1 390 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 MTG2Q9H4K7 406 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 FGFR1OP2Q9NVK5 253 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 HCN2Q9UL51 889 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 GRID1Q9ULK0 1009 aa18.9■□□□□ 0.62
SMPD1-203ENST00000527275 USP1O94782 785 aa18.89■□□□□ 0.62
SMPD1-203ENST00000527275 CES1P23141 567 aa18.89■□□□□ 0.62
SMPD1-203ENST00000527275 NAB1Q13506 487 aa18.89■□□□□ 0.62
SMPD1-203ENST00000527275 ANKRD20A4Q4UJ75 823 aa18.89■□□□□ 0.62
SMPD1-203ENST00000527275 MROH9Q5TGP6 573 aa18.89■□□□□ 0.62
SMPD1-203ENST00000527275 NUDT18Q6ZVK8 323 aa18.89■□□□□ 0.62
SMPD1-203ENST00000527275 EZH1Q92800 747 aaPredicted RBP18.89■□□□□ 0.62
SMPD1-203ENST00000527275 CERS2Q96G23 380 aa18.89■□□□□ 0.62
SMPD1-203ENST00000527275 APOPT1Q96IL0 206 aa18.89■□□□□ 0.62
SMPD1-203ENST00000527275 SLC2A4RGQ9NR83 387 aa18.89■□□□□ 0.62
SMPD1-203ENST00000527275 PRKAG3Q9UGI9 489 aa18.89■□□□□ 0.62
SMPD1-203ENST00000527275 EVLQ9UI08 416 aaPredicted RBP18.89■□□□□ 0.62
SMPD1-203ENST00000527275 PCDHGC4Q9Y5F7 938 aa18.89■□□□□ 0.62
SMPD1-203ENST00000527275 FAM169AQ9Y6X4 670 aa18.89■□□□□ 0.62
SMPD1-203ENST00000527275 FAM237BA0A1B0GVD1 139 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 HMX2A2RU54 273 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 RFPL1O75677 317 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 ERVK-10P10266 1014 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 CNTFP26441 200 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 GKP32189 559 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 ADRA1AP35348 466 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 VASPP50552 380 aaPredicted RBP18.89■□□□□ 0.61
SMPD1-203ENST00000527275 ST8SIA6P61647 398 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 SNRPD1P62314 119 aaKnown RBP18.89■□□□□ 0.61
SMPD1-203ENST00000527275 PON2Q15165 354 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 ZNF449Q6P9G9 518 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 NCEH1Q6PIU2 408 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 DPY19L3Q6ZPD9 716 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 SRLQ86TD4 932 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 RYBPQ8N488 228 aaPredicted RBP18.89■□□□□ 0.61
SMPD1-203ENST00000527275 PCDH20Q8N6Y1 951 aaKnown RBP18.89■□□□□ 0.61
SMPD1-203ENST00000527275 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.89■□□□□ 0.61
SMPD1-203ENST00000527275 CABS1Q96KC9 395 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 FICDQ9BVA6 458 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 C8orf33Q9H7E9 229 aaPredicted RBP18.89■□□□□ 0.61
SMPD1-203ENST00000527275 CHRAC1Q9NRG0 131 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 SLC17A6Q9P2U8 582 aa18.89■□□□□ 0.61
SMPD1-203ENST00000527275 WASH3PC4AMC7 463 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 IGSF6O95976 241 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 ZNF234Q14588 700 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 FNDC3BQ53EP0 1204 aaKnown RBP18.88■□□□□ 0.61
SMPD1-203ENST00000527275 RANBP10Q6VN20 620 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 PACS1Q6VY07 963 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 CCDC197Q8NCU1 140 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 OR2A12Q8NGT7 310 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 UCMAQ8WVF2 138 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 C12orf65Q9H3J6 166 aaKnown RBP18.88■□□□□ 0.61
SMPD1-203ENST00000527275 IL1RAPL1Q9NZN1 696 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 ZFATQ9P243 1243 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 SLC17A7Q9P2U7 560 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 SOX13Q9UN79 622 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 SLC8A2Q9UPR5 921 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 ANKRD36A6QL64 1941 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 ZCWPW2A0A1B0GU75 182 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 K7EQS6 105 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 ADRA1DP25100 572 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 CHRNA4P43681 627 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 CSNK1DP48730 415 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 NEK3P51956 506 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 AP1S1P61966 158 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 FRG1Q14331 258 aaKnown RBP18.88■□□□□ 0.61
SMPD1-203ENST00000527275 PDK4Q16654 411 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 CARD16Q5EG05 197 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 EGFLAMQ63HQ2 1017 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 RASSF3Q86WH2 238 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 SUGP1Q8IWZ8 645 aaKnown RBP18.88■□□□□ 0.61
SMPD1-203ENST00000527275 PTPRN2Q92932 1015 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 VOPP1Q96AW1 172 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 MFSD3Q96ES6 412 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 ACOX2Q99424 681 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 STARD13Q9Y3M8 1113 aa18.88■□□□□ 0.61
SMPD1-203ENST00000527275 COPEO14579 308 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms