RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 URB1-AS1Q96HZ7 61 aa2.8□□□□□ -1.96
ECHDC1-218ENST00000525745 TM6SF1Q9BZW5 370 aa2.8□□□□□ -1.96
ECHDC1-218ENST00000525745 CTDSP1Q9GZU7 261 aa2.8□□□□□ -1.96
ECHDC1-218ENST00000525745 HIPK3Q9H422 1215 aa2.8□□□□□ -1.96
ECHDC1-218ENST00000525745 C6orf106Q9H6K1 298 aaPredicted RBP2.8□□□□□ -1.96
ECHDC1-218ENST00000525745 IL21RQ9HBE5 538 aa2.8□□□□□ -1.96
ECHDC1-218ENST00000525745 Q9N2J8 555 aa2.8□□□□□ -1.96
ECHDC1-218ENST00000525745 CGNQ9P2M7 1197 aaKnown RBP2.8□□□□□ -1.96
ECHDC1-218ENST00000525745 NRBP1Q9UHY1 535 aa2.8□□□□□ -1.96
ECHDC1-218ENST00000525745 FZD10Q9ULW2 581 aa2.8□□□□□ -1.96
ECHDC1-218ENST00000525745 ICAM5Q9UMF0 924 aa2.8□□□□□ -1.96
ECHDC1-218ENST00000525745 DHDHQ9UQ10 334 aa2.8□□□□□ -1.96
ECHDC1-218ENST00000525745 V9GYY5 206 aaPredicted RBP2.8□□□□□ -1.96
ECHDC1-218ENST00000525745 ITSN1Q15811 1721 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 MROH2AA6NES4 1674 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 DIP2AQ14689 1571 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 TULP4Q9NRJ4 1543 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 OVOS2A0A0G2JMS6 1433 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 NCAPD2Q15021 1401 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 YTHDC2Q9H6S0 1430 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 SBNO1A3KN83 1393 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 NPHP3Q7Z494 1330 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 TTC21AQ8NDW8 1320 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 UQCRHLA0A096LP55 91 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 GOLGA6L4A6NEF3 574 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 RGS14O43566 566 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 SPRY3O43610 288 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 DHX16O60231 1041 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 TSPAN3O60637 253 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 METTL18O95568 372 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 IGHDP01880 384 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 UQCRHP07919 91 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 WEE2P0C1S8 567 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 ARSBP15848 533 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 PSMA5P28066 241 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 TYK2P29597 1187 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 COMPP49747 757 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 RIPK4P57078 832 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 SLC20A2Q08357 652 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 G3BP1Q13283 466 aaKnown RBP eCLIP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 BYSLQ13895 437 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 AP5B1Q2VPB7 878 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 C9orf50Q5SZB4 431 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 TEX35Q5T0J7 233 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 OTUD1Q5VV17 481 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 CYP26C1Q6V0L0 522 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 KRBA2Q6ZNG9 492 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 CAMK1DQ8IU85 385 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 FAM217AQ8IXS0 508 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 FAM185AQ8N0U4 392 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 CNTROBQ8N137 903 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 SLC25A41Q8N5S1 370 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 PDILTQ8N807 584 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 CMASQ8NFW8 434 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 GABPB2Q8TAK5 448 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 SH3KBP1Q96B97 665 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 MAELQ96JY0 434 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 UBXN10Q96LJ8 280 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 SLITRK1Q96PX8 696 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 REEP2Q9BRK0 252 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 CENPOQ9BU64 300 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 IFT27Q9BW83 186 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 FAM107BQ9H098 131 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 CDT1Q9H211 546 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 TLR8Q9NR97 1041 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 RASSF1Q9NS23 344 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 DDX19AQ9NUU7 478 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 CWC15Q9P013 229 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 HMG20BQ9P0W2 317 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 IFT80Q9P2H3 777 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 CDH22Q9UJ99 828 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 HOOK1Q9UJC3 728 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 SLC4A4Q9Y6R1 1079 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 EVPLQ92817 2033 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 KIF20BQ96Q89 1820 aa2.79□□□□□ -1.96
ECHDC1-218ENST00000525745 SPATA31D1Q6ZQQ2 1576 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 CPS1P31327 1500 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 PTPRMP28827 1452 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 TRIP12Q14669 1992 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 MAP3K5Q99683 1374 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 PLEKHG1Q9ULL1 1385 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 TTC41PQ6P2S7 1318 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 VWA3AA6NCI4 1184 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 OR6C68A6NDL8 312 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 GOLGA6L19H0YKK7 550 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 J3KRW8 73 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 EYA2O00167 538 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 KLK10O43240 276 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 GRID2O43424 1007 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 KIF1CO43896 1103 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 RNASEH2AO75792 299 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 ZNF432O94892 652 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 IL1AP01583 271 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 LCATP04180 440 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 PRSS2P07478 247 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 CNPP09543 421 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 CKMT1AP12532 417 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 PRKCHP24723 683 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 MCM3P25205 808 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms