RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 GJC1P36383 396 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 NR2C2P49116 596 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 POLR2LP62875 67 aaKnown RBP10.54□□□□□ -0.72
RBBP4-216ENST00000525506 SLC10A7Q0GE19 358 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 PDE1CQ14123 709 aaPredicted RBP10.54□□□□□ -0.72
RBBP4-216ENST00000525506 ATP13A4Q4VNC1 1196 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 ODF2Q5BJF6 829 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 ZFYVE27Q5T4F4 411 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 HES3Q5TGS1 186 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 MARC1Q5VT66 337 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 RAD9BQ6WBX8 426 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 KYAT3Q6YP21 454 aaKnown RBP10.54□□□□□ -0.72
RBBP4-216ENST00000525506 BZW1Q7L1Q6 419 aaKnown RBP10.54□□□□□ -0.72
RBBP4-216ENST00000525506 SRLQ86TD4 932 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 ZSWIM9Q86XI8 627 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 CPNE8Q86YQ8 564 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 CAMK1DQ8IU85 385 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 KATNAL2Q8IYT4 538 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 CCDC112Q8NEF3 446 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 TPCN2Q8NHX9 752 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.54□□□□□ -0.72
RBBP4-216ENST00000525506 CXorf40AQ8TE69 158 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 CENPTQ96BT3 561 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 NSMCE3Q96MG7 304 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 LENG8Q96PV6 779 aaPredicted RBP10.54□□□□□ -0.72
RBBP4-216ENST00000525506 NUDCD1Q96RS6 583 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 TCEAL2Q9H3H9 227 aaPredicted RBP10.54□□□□□ -0.72
RBBP4-216ENST00000525506 SUV39H2Q9H5I1 410 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 MBNL1Q9NR56 388 aaKnown RBP10.54□□□□□ -0.72
RBBP4-216ENST00000525506 GPR27Q9NS67 375 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 DTLQ9NZJ0 730 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 PNMA8BQ9ULN7 279 aaPredicted RBP10.54□□□□□ -0.72
RBBP4-216ENST00000525506 RAXQ9Y2V3 346 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 REXO2Q9Y3B8 237 aaKnown RBP10.54□□□□□ -0.72
RBBP4-216ENST00000525506 ALG6Q9Y672 507 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 FAM208BQ5VWN6 2430 aa10.54□□□□□ -0.72
RBBP4-216ENST00000525506 ZFYVE26Q68DK2 2539 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 SPTY2D1-AS1A0A0U1RR47 76 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 TRAFD1O14545 582 aaPredicted RBP10.53□□□□□ -0.72
RBBP4-216ENST00000525506 TOR1BO14657 336 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 APOL1O14791 398 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 MUSKO15146 869 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 MATN3O15232 486 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 TM7SF2O76062 418 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 KRT1P04264 644 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 C1SP09871 688 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 XPAP23025 273 aaPredicted RBP10.53□□□□□ -0.72
RBBP4-216ENST00000525506 NFKBIAP25963 317 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 CTNNA1P35221 906 aaKnown RBP10.53□□□□□ -0.72
RBBP4-216ENST00000525506 MMP13P45452 471 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 RABIFP47224 123 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 PFN3P60673 137 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 DAB2P98082 770 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 BCL2L1Q07817 233 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 PPIDQ08752 370 aaKnown RBP10.53□□□□□ -0.72
RBBP4-216ENST00000525506 EIF2B5Q13144 721 aaKnown RBP10.53□□□□□ -0.72
RBBP4-216ENST00000525506 TARDBPQ13148 414 aaKnown RBP eCLIP10.53□□□□□ -0.72
RBBP4-216ENST00000525506 ZNF211Q13398 564 aaPredicted RBP10.53□□□□□ -0.72
RBBP4-216ENST00000525506 TFDP2Q14188 446 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 AGERQ15109 404 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 PPP2R5EQ16537 467 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 UGP2Q16851 508 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 TFDP3Q5H9I0 405 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 CFAP58Q5T655 872 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 ERAP2Q6P179 960 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 NYAP1Q6ZVC0 841 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 DAAM2Q86T65 1068 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 TMPRSS12Q86WS5 348 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 DCP2Q8IU60 420 aaKnown RBP10.53□□□□□ -0.72
RBBP4-216ENST00000525506 RBFAQ8N0V3 343 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 PLD5Q8N7P1 536 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 ZNF548Q8NEK5 533 aaPredicted RBP10.53□□□□□ -0.72
RBBP4-216ENST00000525506 OR4C6Q8NH72 309 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 EXD1Q8NHP7 514 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 IFT43Q96FT9 208 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 RBM41Q96IZ5 413 aaKnown RBP10.53□□□□□ -0.72
RBBP4-216ENST00000525506 OLFM3Q96PB7 478 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 C1QTNF7Q9BXJ2 289 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 MAK16Q9BXY0 300 aaKnown RBP10.53□□□□□ -0.72
RBBP4-216ENST00000525506 POLR1EQ9GZS1 481 aaKnown RBP10.53□□□□□ -0.72
RBBP4-216ENST00000525506 PCDH12Q9NPG4 1184 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 EFR3BQ9Y2G0 817 aa10.53□□□□□ -0.72
RBBP4-216ENST00000525506 ZFHX4Q86UP3 3567 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 LY6G6EA0A0G2JKS1 128 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 CCDC66A2RUB6 948 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 RCCD1A6NED2 376 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 K7ESM1 405 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 PPP1R12AO14974 1030 aaPredicted RBP10.52□□□□□ -0.73
RBBP4-216ENST00000525506 SCAMP1O15126 338 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 ARHGAP6O43182 974 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 HTRA2O43464 458 aaPredicted RBP10.52□□□□□ -0.73
RBBP4-216ENST00000525506 ZRANB2O95218 330 aaKnown RBP eCLIP10.52□□□□□ -0.73
RBBP4-216ENST00000525506 CSF2P04141 144 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 JUNDP17535 347 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 TGM2P21980 687 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 ACP1P24666 158 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 PTPN7P35236 360 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 MMP12P39900 470 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 CDKN2BP42772 138 aa10.52□□□□□ -0.73
RBBP4-216ENST00000525506 COPS2P61201 443 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms