RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 SOCS5O75159 536 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 RECQL5O94762 991 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 LCA5LO95447 670 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 HLA-DQB2P05538 268 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 PDHA1P08559 390 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 ELFN1P0C7U0 828 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 CCNB1P14635 433 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 NME1P15531 152 aaKnown RBP12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 CTPS1P17812 591 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 GM2AP17900 193 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 MX2P20592 715 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 CYLC1P35663 651 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 ACADVLP49748 655 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 YPEL5P62699 121 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 C1orf61Q13536 156 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 PTK2BQ14289 1009 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 ACOX1Q15067 660 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 TCEA2Q15560 299 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 ST3GAL2Q16842 350 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 PROX2Q3B8N5 592 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 ARMC12Q5T9G4 340 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 FAXCQ5TGI0 409 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 TIGD7Q6NT04 549 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 MFSD7Q6UXD7 560 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 CCDC13Q8IYE1 715 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 CCDC170Q8IYT3 715 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 PLD5Q8N7P1 536 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 ZNF548Q8NEK5 533 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 LMX1AQ8TE12 382 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 PANX2Q96RD6 677 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 APOOQ9BUR5 198 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 PHTF1Q9UMS5 762 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 RAI2Q9Y5P3 530 aa12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 EPN1Q9Y6I3 576 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-205ENST00000525079 FAM221BA6H8Z2 402 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 RCCD1A6NED2 376 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 H3BM21 787 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 KCNK1O00180 336 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 RFPL3O75679 317 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 PGLSO95336 258 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 JCHAINP01591 159 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 PROS1P07225 676 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 ALPIP09923 528 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 KRT10P13645 584 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 CKMT2P17540 419 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 VIPR1P32241 457 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 DAB2P98082 770 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 NIPAL4Q0D2K0 466 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 ZNF211Q13398 564 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 CNGA3Q16281 694 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 DEFB133Q30KQ1 61 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 HS1BP3Q53T59 392 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 RALGPS1Q5JS13 557 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 LRRC38Q5VT99 294 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 SLC9A4Q6AI14 798 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 ENPP7Q6UWV6 458 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 RAD9BQ6WBX8 426 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 CCNI2Q6ZMN8 369 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 MACC1Q6ZN28 852 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 TMPRSS7Q7RTY8 843 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 RD3Q7Z3Z2 195 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 TSPAN33Q86UF1 283 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 PHACTR4Q8IZ21 702 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 OR4C6Q8NH72 309 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 TSACCQ96A04 125 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 HDAC11Q96DB2 347 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 ZNF830Q96NB3 372 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 ANP32EQ9BTT0 268 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 CEP41Q9BYV8 373 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 POLR1EQ9GZS1 481 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 DDX56Q9NY93 547 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 APOBEC3BQ9UH17 382 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 SALL4Q9UJQ4 1053 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 CHKBQ9Y259 395 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 PLXNB3Q9ULL4 1909 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 AKAP13Q12802 2813 aa12.89□□□□□ -0.35
TRAPPC4-205ENST00000525079 A0A1W2PQ67 120 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 CFAP69A5D8W1 941 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 NEMP2A6NFY4 417 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 NPIPB15A6NHN6 443 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 K7ESM1 405 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 AQP9O43315 295 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 GCATO75600 419 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 HEXIM1O94992 359 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 NDUFA10O95299 355 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 ALPPL2P10696 532 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 LHCGRP22888 699 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 MARCKSL1P49006 195 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 HADHBP55084 474 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 PPARDQ03181 441 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 PPIDQ08752 370 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 AP1B1Q10567 949 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 ZBTB17Q13105 803 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 AGERQ15109 404 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 PRRT3Q5FWE3 981 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 KAZNQ674X7 775 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 HSD11B1LQ7Z5J1 315 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 TMTC1Q8IUR5 882 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 HID1Q8IV36 788 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 PELI3Q8N2H9 469 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms