RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 ANAPC5Q9UJX4 755 aa4.48□□□□□ -1.69
PCM1-223ENST00000524356 ABT1Q9ULW3 272 aaKnown RBP4.48□□□□□ -1.69
PCM1-223ENST00000524356 AGAP1Q9UPQ3 857 aa4.48□□□□□ -1.69
PCM1-223ENST00000524356 IKBKGQ9Y6K9 419 aa4.48□□□□□ -1.69
PCM1-223ENST00000524356 C4AP0C0L4 1744 aa4.48□□□□□ -1.69
PCM1-223ENST00000524356 INSRP06213 1382 aa4.48□□□□□ -1.69
PCM1-223ENST00000524356 ITGB4P16144 1822 aa4.48□□□□□ -1.69
PCM1-223ENST00000524356 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
PCM1-223ENST00000524356 RNF123Q5XPI4 1314 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 A0A0C4DFX4 3053 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 PKD1L3Q7Z443 1732 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 KIAA1210Q9ULL0 1709 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 ARFGEF1Q9Y6D6 1849 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 CD8B2A6NJW9 211 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 LIPT2A6NK58 231 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 SAC3D1A6NKF1 404 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 ZNF785A8K8V0 405 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 H0YIN7 160 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 CCP110O43303 1012 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 RRP9O43818 475 aaKnown RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 PDE8BO95263 885 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 VIPP01282 170 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 GNAI2P04899 355 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 SNRNP70P08621 437 aaKnown RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 PIM1P11309 404 aaPredicted RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 PCP11498 1178 aaKnown RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 CYP19A1P11511 503 aaPredicted RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 EEF1DP29692 281 aaKnown RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 EPHX2P34913 555 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 GP5P40197 560 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 PBX3P40426 434 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 EPS15P42566 896 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 LIMK1P53667 647 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 SF3A3Q12874 501 aaKnown RBP eCLIP4.47□□□□□ -1.693e-6■□□□□ 9.9
PCM1-223ENST00000524356 GPS1Q13098 491 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 TNFAIP1Q13829 316 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 HLXQ14774 488 aaPredicted RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 LASP1Q14847 261 aaKnown RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 TNIP1Q15025 636 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 TAF7Q15545 349 aaPredicted RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 TWIST1Q15672 202 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 PABPC1LQ4VXU2 614 aaKnown RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 LRRC24Q50LG9 513 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 UBAP2Q5T6F2 1119 aaKnown RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 TBC1D9BQ66K14 1250 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 ADALQ6DHV7 355 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 ABLIM2Q6H8Q1 611 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 WDR73Q6P4I2 378 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 C11orf88Q6PI97 169 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 CHSY1Q86X52 802 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 AOPEPQ8N6M6 819 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 FAM71DQ8N9W8 422 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 ZNF540Q8NDQ6 660 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 OR6J1Q8NGC5 347 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 DEPDC1BQ8WUY9 529 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 HMGB4Q8WW32 186 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 EXOC4Q96A65 974 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 GRAMD1AQ96CP6 724 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 MCRS1Q96EZ8 462 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 CCDC43Q96MW1 224 aaKnown RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 LENG8Q96PV6 779 aaPredicted RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 MAK16Q9BXY0 300 aaKnown RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 TRIM5Q9C035 493 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 TINAGL1Q9GZM7 467 aaPredicted RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 INTS2Q9H0H0 1204 aaKnown RBP4.47□□□□□ -1.69
PCM1-223ENST00000524356 HIPK2Q9H2X6 1198 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 VEZTQ9HBM0 779 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 LTB4R2Q9NPC1 389 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 ADPRHL2Q9NX46 363 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 SELENONQ9NZV5 590 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 CFAP97Q9P2B7 532 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 NARFQ9UHQ1 456 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 SLC45A2Q9UMX9 530 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 HPSEQ9Y251 543 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 RCE1Q9Y256 329 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 ZBTB1Q9Y2K1 713 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 KCNE2Q9Y6J6 123 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 CCDC88AQ3V6T2 1871 aa4.47□□□□□ -1.69
PCM1-223ENST00000524356 VIRMAQ69YN4 1812 aaKnown RBP4.46□□□□□ -1.69
PCM1-223ENST00000524356 ROCK2O75116 1388 aaKnown RBP4.46□□□□□ -1.7
PCM1-223ENST00000524356 TONSLQ96HA7 1378 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 PNMA6EA0A0J9YXQ4 647 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 URADA6NGE7 173 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 EFCAB8A8MWE9 144 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 M0QYG6 137 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 MYO1CO00159 1063 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 TSPAN4O14817 238 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 SOCS5O75159 536 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 STAM2O75886 525 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 CAMTA2O94983 1202 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 SPARCP09486 303 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 RARGP13631 454 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 PPARGP37231 505 aaPredicted RBP4.46□□□□□ -1.7
PCM1-223ENST00000524356 ZNF135P52742 658 aaPredicted RBP4.46□□□□□ -1.7
PCM1-223ENST00000524356 MRPS5P82675 430 aaKnown RBP4.46□□□□□ -1.7
PCM1-223ENST00000524356 ACTN3Q08043 901 aaPredicted RBP4.46□□□□□ -1.7
PCM1-223ENST00000524356 ZNF844Q08AG5 666 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 WSCD2Q2TBF2 565 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 LEXMQ3ZCV2 418 aa4.46□□□□□ -1.7
PCM1-223ENST00000524356 RAB41Q5JT25 222 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms