RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 BUB1BO60566 1050 aaPredicted RBP26.08■■□□□ 1.77
PVT1-219ENST00000523427 YBEYP58557 167 aaPredicted RBP26.08■■□□□ 1.77
PVT1-219ENST00000523427 MTM1Q13496 603 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 AMZ1Q400G9 498 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 CERCAMQ5T4B2 595 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 ATG14Q6ZNE5 492 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 TMPRSS9Q7Z410 1059 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 SPRED1Q7Z699 444 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 ZSCAN1Q8NBB4 408 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 CCL4L1Q8NHW4 92 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 FUBP1Q96AE4 644 aaKnown RBP26.08■■□□□ 1.77
PVT1-219ENST00000523427 CMKLR1Q99788 373 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 TMEM168Q9H0V1 697 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 RDH14Q9HBH5 336 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 ADAM22Q9P0K1 906 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 ATP8A1Q9Y2Q0 1164 aa26.08■■□□□ 1.77
PVT1-219ENST00000523427 LRRK1Q38SD2 2015 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 TLN1Q9Y490 2541 aaKnown RBP26.07■■□□□ 1.76
PVT1-219ENST00000523427 A8MX80 341 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 J3KR12 359 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 ITGB2P05107 769 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 WT1P19544 449 aaPredicted RBP26.07■■□□□ 1.76
PVT1-219ENST00000523427 POLR2FP61218 127 aaKnown RBP26.07■■□□□ 1.76
PVT1-219ENST00000523427 ZFP36L1Q07352 338 aaKnown RBP26.07■■□□□ 1.76
PVT1-219ENST00000523427 TBR1Q16650 682 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 PARP15Q460N3 678 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 MAP9Q49MG5 647 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 C14orf28Q4W4Y0 310 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 OR56A4Q8NGH8 313 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 CELF6Q96J87 481 aaKnown RBP26.07■■□□□ 1.76
PVT1-219ENST00000523427 PCDHB18PQ96TA0 734 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 SEMA6CQ9H3T2 930 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 CATSPERBQ9H7T0 1116 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 CYP4F12Q9HCS2 524 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 STARD5Q9NSY2 213 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 APPL1Q9UKG1 709 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 DGKBQ9Y6T7 804 aa26.07■■□□□ 1.76
PVT1-219ENST00000523427 CCP110O43303 1012 aa26.06■■□□□ 1.76
PVT1-219ENST00000523427 RECQL5O94762 991 aaPredicted RBP26.06■■□□□ 1.76
PVT1-219ENST00000523427 ITGB6P18564 788 aa26.06■■□□□ 1.76
PVT1-219ENST00000523427 MMP12P39900 470 aa26.06■■□□□ 1.76
PVT1-219ENST00000523427 NSFP46459 744 aaKnown RBP26.06■■□□□ 1.76
PVT1-219ENST00000523427 UBE2HP62256 183 aa26.06■■□□□ 1.76
PVT1-219ENST00000523427 PTP4A2Q12974 167 aa26.06■■□□□ 1.76
PVT1-219ENST00000523427 HCAR2Q8TDS4 363 aa26.06■■□□□ 1.76
PVT1-219ENST00000523427 GANQ9H2C0 597 aa26.06■■□□□ 1.76
PVT1-219ENST00000523427 FAM207AQ9NSI2 230 aaPredicted RBP26.06■■□□□ 1.76
PVT1-219ENST00000523427 SEPT11Q9NVA2 429 aaKnown RBP26.06■■□□□ 1.76
PVT1-219ENST00000523427 TSPAN11A1L157 253 aa26.05■■□□□ 1.76
PVT1-219ENST00000523427 C9orf172C9J069 976 aa26.05■■□□□ 1.76
PVT1-219ENST00000523427 TEX33O43247 280 aa26.05■■□□□ 1.76
PVT1-219ENST00000523427 SOX5P35711 763 aa26.05■■□□□ 1.76
PVT1-219ENST00000523427 GRM3Q14832 879 aa26.05■■□□□ 1.76
PVT1-219ENST00000523427 C16orf72Q14CZ0 275 aa26.05■■□□□ 1.76
PVT1-219ENST00000523427 SPECC1LQ69YQ0 1117 aa26.05■■□□□ 1.76
PVT1-219ENST00000523427 BRAT1Q6PJG6 821 aa26.05■■□□□ 1.76
PVT1-219ENST00000523427 OGFOD3Q6PK18 319 aa26.05■■□□□ 1.76
PVT1-219ENST00000523427 XKR5Q6UX68 686 aa26.05■■□□□ 1.76
PVT1-219ENST00000523427 ZNF641Q96N77 438 aaPredicted RBP26.05■■□□□ 1.76
PVT1-219ENST00000523427 VPS16Q9H269 839 aa26.05■■□□□ 1.76
PVT1-219ENST00000523427 ALDH4A1P30038 563 aa26.04■■□□□ 1.76
PVT1-219ENST00000523427 RGRP47804 291 aa26.04■■□□□ 1.76
PVT1-219ENST00000523427 TCP11X2Q5H9J9 407 aa26.04■■□□□ 1.76
PVT1-219ENST00000523427 TRIM72Q6ZMU5 477 aa26.04■■□□□ 1.76
PVT1-219ENST00000523427 SRLQ86TD4 932 aa26.04■■□□□ 1.76
PVT1-219ENST00000523427 UMODL1-AS1Q8N2C9 162 aa26.04■■□□□ 1.76
PVT1-219ENST00000523427 TMEM159Q96B96 161 aa26.04■■□□□ 1.76
PVT1-219ENST00000523427 LGR4Q9BXB1 951 aa26.04■■□□□ 1.76
PVT1-219ENST00000523427 FZD10Q9ULW2 581 aa26.04■■□□□ 1.76
PVT1-219ENST00000523427 TERTO14746 1132 aaKnown RBP26.03■■□□□ 1.76
PVT1-219ENST00000523427 ELFN1P0C7U0 828 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 UNGP13051 313 aaPredicted RBP26.03■■□□□ 1.76
PVT1-219ENST00000523427 CCL4P13236 92 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 KELP23276 732 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 ERCC5P28715 1186 aaPredicted RBP26.03■■□□□ 1.76
PVT1-219ENST00000523427 MAZP56270 477 aaKnown RBP26.03■■□□□ 1.76
PVT1-219ENST00000523427 OR1D5P58170 312 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 KIAA1024LP59773 190 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 RALGDSQ12967 914 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 HLTFQ14527 1009 aaKnown RBP eCLIP26.03■■□□□ 1.762e-11■□□□□ 9.4
PVT1-219ENST00000523427 AGERQ15109 404 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 SLITRK4Q8IW52 837 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 TSEN2Q8NCE0 465 aaKnown RBP26.03■■□□□ 1.76
PVT1-219ENST00000523427 HTR3CQ8WXA8 447 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 ATP13A3Q9H7F0 1226 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 PDFQ9HBH1 243 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 GPATCH2LQ9NWQ4 482 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 AKAP7Q9P0M2 348 aaPredicted RBP26.03■■□□□ 1.76
PVT1-219ENST00000523427 ANKRD36A6QL64 1941 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 LRP4O75096 1905 aa26.03■■□□□ 1.76
PVT1-219ENST00000523427 SCN8AQ9UQD0 1980 aa26.02■■□□□ 1.76
PVT1-219ENST00000523427 EPHB6O15197 1021 aa26.02■■□□□ 1.76
PVT1-219ENST00000523427 SUV39H1O43463 412 aa26.02■■□□□ 1.76
PVT1-219ENST00000523427 B4GAT1O43505 415 aa26.02■■□□□ 1.76
PVT1-219ENST00000523427 PNLIPP16233 465 aa26.02■■□□□ 1.76
PVT1-219ENST00000523427 SERPINA4P29622 427 aa26.02■■□□□ 1.76
PVT1-219ENST00000523427 TPI1P60174 286 aa26.02■■□□□ 1.76
PVT1-219ENST00000523427 ACOX1Q15067 660 aa26.02■■□□□ 1.76
PVT1-219ENST00000523427 TMEM164Q5U3C3 297 aa26.02■■□□□ 1.76
PVT1-219ENST00000523427 DNAJC24Q6P3W2 148 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms