RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 FAM114A1Q8IWE2 563 aa22.88■■□□□ 1.25
PVT1-218ENST00000523328 FAM46DQ8NEK8 389 aa22.88■■□□□ 1.25
PVT1-218ENST00000523328 SLC30A5Q8TAD4 765 aa22.88■■□□□ 1.25
PVT1-218ENST00000523328 C11orf70Q9BRQ4 267 aa22.88■■□□□ 1.25
PVT1-218ENST00000523328 FGF22Q9HCT0 170 aa22.88■■□□□ 1.25
PVT1-218ENST00000523328 LRIT1Q9P2V4 623 aa22.88■■□□□ 1.25
PVT1-218ENST00000523328 A0A1W2PQC6 194 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 TMEM202A6NGA9 273 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 BUB1BO60566 1050 aaPredicted RBP22.87■■□□□ 1.25
PVT1-218ENST00000523328 CHRNB2P17787 502 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 MAPK10P53779 464 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 KIAA1024LP59773 190 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 CYP4F2P78329 520 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 FMO1Q01740 532 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 PTP4A2Q12974 167 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 GRM3Q14832 879 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 C14orf28Q4W4Y0 310 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 HSP90AA4PQ58FG1 418 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 SLFN11Q7Z7L1 901 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 ZSCAN1Q8NBB4 408 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 OR56A4Q8NGH8 313 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 FUBP1Q96AE4 644 aaKnown RBP22.87■■□□□ 1.25
PVT1-218ENST00000523328 MRPL40Q9NQ50 206 aaKnown RBP22.87■■□□□ 1.25
PVT1-218ENST00000523328 ATP8A1Q9Y2Q0 1164 aa22.87■■□□□ 1.25
PVT1-218ENST00000523328 WASH4PA8MWX3 477 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 NUDT21O43809 227 aaKnown RBP22.86■■□□□ 1.25
PVT1-218ENST00000523328 PRKCGP05129 697 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 CD82P27701 267 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 RFC1P35251 1148 aaPredicted RBP22.86■■□□□ 1.25
PVT1-218ENST00000523328 CDR2Q01850 454 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 C16orf72Q14CZ0 275 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 PARP15Q460N3 678 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 COLEC12Q5KU26 742 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 ERAP2Q6P179 960 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 BRAT1Q6PJG6 821 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 UMODL1-AS1Q8N2C9 162 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 ZNF641Q96N77 438 aaPredicted RBP22.86■■□□□ 1.25
PVT1-218ENST00000523328 FUCA2Q9BTY2 467 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 TMEM168Q9H0V1 697 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 SEMA6CQ9H3T2 930 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 PDFQ9HBH1 243 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 PCDHB11Q9Y5F2 797 aa22.86■■□□□ 1.25
PVT1-218ENST00000523328 B4DGG1 531 aa22.85■■□□□ 1.25
PVT1-218ENST00000523328 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.85■■□□□ 1.25
PVT1-218ENST00000523328 KRT3P12035 628 aa22.85■■□□□ 1.25
PVT1-218ENST00000523328 GSCP56915 257 aaPredicted RBP22.85■■□□□ 1.25
PVT1-218ENST00000523328 B4GALNT1Q00973 533 aa22.85■■□□□ 1.25
PVT1-218ENST00000523328 RALGDSQ12967 914 aa22.85■■□□□ 1.25
PVT1-218ENST00000523328 ARHGEF7Q14155 803 aa22.85■■□□□ 1.25
PVT1-218ENST00000523328 CLCA4Q14CN2 919 aa22.85■■□□□ 1.25
PVT1-218ENST00000523328 SPECC1LQ69YQ0 1117 aa22.85■■□□□ 1.25
PVT1-218ENST00000523328 CAMK1DQ8IU85 385 aa22.85■■□□□ 1.25
PVT1-218ENST00000523328 CCL4L1Q8NHW4 92 aa22.85■■□□□ 1.25
PVT1-218ENST00000523328 B3GNT4Q9C0J1 378 aa22.85■■□□□ 1.25
PVT1-218ENST00000523328 UBA2Q9UBT2 640 aaPredicted RBP22.85■■□□□ 1.25
PVT1-218ENST00000523328 FLNCQ14315 2725 aa22.85■■□□□ 1.25
PVT1-218ENST00000523328 CFAP69A5D8W1 941 aa22.84■■□□□ 1.25
PVT1-218ENST00000523328 CACNB4O00305 520 aaPredicted RBP22.84■■□□□ 1.25
PVT1-218ENST00000523328 TNFRSF10CO14798 259 aa22.84■■□□□ 1.25
PVT1-218ENST00000523328 B4GAT1O43505 415 aa22.84■■□□□ 1.25
PVT1-218ENST00000523328 PPFIA2O75334 1257 aa22.84■■□□□ 1.25
PVT1-218ENST00000523328 RECQL5O94762 991 aaPredicted RBP22.84■■□□□ 1.25
PVT1-218ENST00000523328 GFPT2O94808 682 aa22.84■■□□□ 1.25
PVT1-218ENST00000523328 UNGP13051 313 aaPredicted RBP22.84■■□□□ 1.25
PVT1-218ENST00000523328 TRIM23P36406 574 aa22.84■■□□□ 1.25
PVT1-218ENST00000523328 PHF19Q5T6S3 580 aa22.84■■□□□ 1.25
PVT1-218ENST00000523328 WDR59Q6PJI9 974 aa22.84■■□□□ 1.25
PVT1-218ENST00000523328 TUBGCP5Q96RT8 1024 aa22.84■■□□□ 1.25
PVT1-218ENST00000523328 SLC25A18Q9H1K4 315 aa22.84■■□□□ 1.25
PVT1-218ENST00000523328 GANQ9H2C0 597 aa22.84■■□□□ 1.25
PVT1-218ENST00000523328 DPEP2Q9H4A9 486 aa22.84■■□□□ 1.25
PVT1-218ENST00000523328 RDH14Q9HBH5 336 aa22.84■■□□□ 1.25
PVT1-218ENST00000523328 GEMIN8Q9NWZ8 242 aaKnown RBP22.84■■□□□ 1.25
PVT1-218ENST00000523328 J3KR12 359 aa22.83■■□□□ 1.25
PVT1-218ENST00000523328 PES1O00541 588 aaKnown RBP22.83■■□□□ 1.25
PVT1-218ENST00000523328 CREB3O43889 395 aa22.83■■□□□ 1.25
PVT1-218ENST00000523328 HOXC4P09017 264 aaPredicted RBP22.83■■□□□ 1.25
PVT1-218ENST00000523328 GM2AP17900 193 aa22.83■■□□□ 1.25
PVT1-218ENST00000523328 GPD1P21695 349 aa22.83■■□□□ 1.25
PVT1-218ENST00000523328 RGRP47804 291 aa22.83■■□□□ 1.25
PVT1-218ENST00000523328 MAP9Q49MG5 647 aa22.83■■□□□ 1.25
PVT1-218ENST00000523328 EFHC2Q5JST6 749 aa22.83■■□□□ 1.25
PVT1-218ENST00000523328 CFAP58Q5T655 872 aa22.83■■□□□ 1.25
PVT1-218ENST00000523328 LIPIQ6XZB0 460 aa22.83■■□□□ 1.25
PVT1-218ENST00000523328 LGR4Q9BXB1 951 aa22.83■■□□□ 1.25
PVT1-218ENST00000523328 CATSPERBQ9H7T0 1116 aa22.83■■□□□ 1.25
PVT1-218ENST00000523328 CPNE6O95741 557 aa22.82■■□□□ 1.24
PVT1-218ENST00000523328 CCL4P13236 92 aa22.82■■□□□ 1.24
PVT1-218ENST00000523328 KELP23276 732 aa22.82■■□□□ 1.24
PVT1-218ENST00000523328 ARSDP51689 593 aa22.82■■□□□ 1.24
PVT1-218ENST00000523328 BECN1Q14457 450 aa22.82■■□□□ 1.24
PVT1-218ENST00000523328 ZNF574Q6ZN55 896 aaPredicted RBP22.82■■□□□ 1.24
PVT1-218ENST00000523328 PIM3Q86V86 326 aa22.82■■□□□ 1.24
PVT1-218ENST00000523328 C17orf82Q86X59 251 aaPredicted RBP22.82■■□□□ 1.24
PVT1-218ENST00000523328 PELI3Q8N2H9 469 aa22.82■■□□□ 1.24
PVT1-218ENST00000523328 PCDHB18PQ96TA0 734 aa22.82■■□□□ 1.24
PVT1-218ENST00000523328 SLC12A9Q9BXP2 914 aa22.82■■□□□ 1.24
PVT1-218ENST00000523328 LRRC19Q9H756 370 aa22.82■■□□□ 1.24
PVT1-218ENST00000523328 CYP4F12Q9HCS2 524 aa22.82■■□□□ 1.24
PVT1-218ENST00000523328 FZD10Q9ULW2 581 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms