RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 DLG3Q92796 817 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 DACT3Q96B18 629 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 ATXN7L3BQ96GX2 97 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 GORASP1Q9BQQ3 440 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 SDCBP2Q9H190 292 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 RSPH9Q9H1X1 276 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 FAM49BQ9NUQ9 324 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 FBXL12Q9NXK8 326 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 AGO1Q9UL18 857 aaKnown RBP6.56□□□□□ -1.36
VPS13B-211ENST00000522802 CA5BQ9Y2D0 317 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 B3GALT1Q9Y5Z6 326 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 U3KQA8 63 aa6.56□□□□□ -1.36
VPS13B-211ENST00000522802 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 HHLA1C9JL84 531 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 RNASEH2AO75792 299 aaKnown RBP6.55□□□□□ -1.36
VPS13B-211ENST00000522802 GCNT3O95395 438 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 C4BPAP04003 597 aaKnown RBP6.55□□□□□ -1.36
VPS13B-211ENST00000522802 CENPBP07199 599 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-211ENST00000522802 GIMD1P0DJR0 217 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 CKMT1AP12532 417 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 SGSHP51688 502 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 PDX1P52945 283 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 METAP1P53582 386 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 ADPRHP54922 357 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 MYL6P60660 151 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 IGFBP7Q16270 282 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 ISXQ2M1V0 245 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 WDR72Q3MJ13 1102 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 KLHDC10Q6PID8 442 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 USP30Q70CQ3 517 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 CHST9Q7L1S5 443 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 TRAPPC11Q7Z392 1133 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 SCD5Q86SK9 330 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 ACOT1Q86TX2 421 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 THNSL2Q86YJ6 484 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 WDR49Q8IV35 697 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 DENND1CQ8IV53 801 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 GPD1LQ8N335 351 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 AADATQ8N5Z0 425 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 OR2T34Q8NGX1 318 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 OR4C6Q8NH72 309 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 WFDC5Q8TCV5 224 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 SLC2A14Q8TDB8 520 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 FNIP1Q8TF40 1166 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 SKA1Q96BD8 255 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 PWWP2AQ96N64 755 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 SLC46A1Q96NT5 459 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 ACCSQ96QU6 501 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 CCNL2Q96S94 520 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-211ENST00000522802 BOCQ9BWV1 1114 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 XYLT2Q9H1B5 865 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 NEUROG2Q9H2A3 272 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 FBXO44Q9H4M3 255 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 MRPL44Q9H9J2 332 aaKnown RBP6.55□□□□□ -1.36
VPS13B-211ENST00000522802 ERVMER34-1Q9H9K5 563 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 CSNK1G1Q9HCP0 422 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 ABCB8Q9NUT2 735 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 RIC8BQ9NVN3 520 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 RASAL2Q9UJF2 1139 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 MAPRE3Q9UPY8 281 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 SCML2Q9UQR0 700 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 CELSR1Q9NYQ6 3014 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 ITPR3Q14573 2671 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 SCN8AQ9UQD0 1980 aa6.55□□□□□ -1.36
VPS13B-211ENST00000522802 RP1P56715 2156 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-211ENST00000522802 ENO4A6NNW6 628 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 LATO43561 262 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 PRPF6O94906 941 aaKnown RBP6.54□□□□□ -1.36
VPS13B-211ENST00000522802 DLDP09622 509 aaKnown RBP6.54□□□□□ -1.36
VPS13B-211ENST00000522802 DLATP10515 647 aaKnown RBP6.54□□□□□ -1.36
VPS13B-211ENST00000522802 TGM2P21980 687 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 DGKAP23743 735 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 RBMS1P29558 406 aaKnown RBP6.54□□□□□ -1.36
VPS13B-211ENST00000522802 CHKAP35790 457 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 CCR10P46092 362 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 PSMD8P48556 350 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 CCR5P51681 352 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 ITGA1P56199 1179 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 ASIC1P78348 528 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 EFEMP1Q12805 493 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 CLCA4Q14CN2 919 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 TGIF1Q15583 401 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 CST6Q15828 149 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 CPZQ66K79 652 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 NAPEPLDQ6IQ20 393 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 CLEC20AQ6ZU45 233 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 CLEC14AQ86T13 490 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 FAM217AQ8IXS0 508 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 DDI1Q8WTU0 396 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 LARP4BQ92615 738 aaKnown RBP6.54□□□□□ -1.36
VPS13B-211ENST00000522802 GOLGA1Q92805 767 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 ARRDC3Q96B67 414 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 KRTAP4-5Q9BYR2 181 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 COMMD8Q9NX08 183 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 GGA2Q9UJY4 613 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 EXOC7Q9UPT5 735 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 NCKAP1Q9Y2A7 1128 aa6.54□□□□□ -1.36
VPS13B-211ENST00000522802 ENTPD2Q9Y5L3 495 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms