RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SAP25Q8TEE9 199 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 FUBP1Q96AE4 644 aaKnown RBP17.95■□□□□ 0.46
CLK4-211ENST00000522556 ZNF830Q96NB3 372 aaPredicted RBP17.95■□□□□ 0.46
CLK4-211ENST00000522556 LENG8Q96PV6 779 aaPredicted RBP17.95■□□□□ 0.46
CLK4-211ENST00000522556 FAM118BQ9BPY3 351 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 C10orf88Q9H8K7 445 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 UCKL1Q9NWZ5 548 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 KLF15Q9UIH9 416 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 PCDHGB2Q9Y5G2 931 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 PCDHA3Q9Y5H8 950 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 ADGRG1Q9Y653 693 aa17.95■□□□□ 0.46
CLK4-211ENST00000522556 FZD6O60353 706 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 PRLP01236 227 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 SPINK2P20155 84 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 PEX5P50542 639 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 GSDMDP57764 484 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 PFN3P60673 137 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 SIM1P81133 766 aaPredicted RBP17.94■□□□□ 0.46
CLK4-211ENST00000522556 CCZ1BP86790 482 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 CCZ1P86791 482 aaPredicted RBP17.94■□□□□ 0.46
CLK4-211ENST00000522556 OVGP1Q12889 678 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 ZNF211Q13398 564 aaPredicted RBP17.94■□□□□ 0.46
CLK4-211ENST00000522556 PRKD1Q15139 912 aaPredicted RBP17.94■□□□□ 0.46
CLK4-211ENST00000522556 KCTD16Q68DU8 428 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 ERAP2Q6P179 960 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 RFLNAQ6ZTI6 216 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 ZC3H18Q86VM9 953 aaKnown RBP17.94■□□□□ 0.46
CLK4-211ENST00000522556 RCOR2Q8IZ40 523 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 PLA2G15Q8NCC3 412 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 DENND6BQ8NEG7 585 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 KIAA1524Q8TCG1 905 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 PIH1D2Q8WWB5 315 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 ASB12Q8WXK4 309 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 SPOCK2Q92563 424 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 SKA1Q96BD8 255 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 TDRD1Q9BXT4 1180 aaKnown RBP17.94■□□□□ 0.46
CLK4-211ENST00000522556 SLC32A1Q9H598 525 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 ERVMER34-1Q9H9K5 563 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 CHKBQ9Y259 395 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 HS3ST3A1Q9Y663 406 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 SPEGQ15772 3267 aa17.94■□□□□ 0.46
CLK4-211ENST00000522556 ARID1BQ8NFD5 2236 aaPredicted RBP17.94■□□□□ 0.46
CLK4-211ENST00000522556 F5H423 210 aaPredicted RBP17.93■□□□□ 0.46
CLK4-211ENST00000522556 FPGTO14772 594 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 FLRT2O43155 660 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 RECQL5O94762 991 aaPredicted RBP17.93■□□□□ 0.46
CLK4-211ENST00000522556 PCCBP05166 539 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 PYGMP11217 842 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 ZFXP17010 805 aaPredicted RBP17.93■□□□□ 0.46
CLK4-211ENST00000522556 CD86P42081 329 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 RXRGP48443 463 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 SUOXP51687 545 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 SKOR1P84550 965 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 KIF5AQ12840 1032 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 PDE1CQ14123 709 aaPredicted RBP17.93■□□□□ 0.46
CLK4-211ENST00000522556 PDK1Q15118 436 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 PPP2R5EQ16537 467 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 ARMC12Q5T9G4 340 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 RHBDD1Q8TEB9 315 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 RBM41Q96IZ5 413 aaKnown RBP17.93■□□□□ 0.46
CLK4-211ENST00000522556 AGAP3Q96P47 875 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 TCEAL2Q9H3H9 227 aaPredicted RBP17.93■□□□□ 0.46
CLK4-211ENST00000522556 GRPEL1Q9HAV7 217 aa17.93■□□□□ 0.46
CLK4-211ENST00000522556 COL5A1P20908 1838 aaPredicted RBP17.93■□□□□ 0.46
CLK4-211ENST00000522556 GOLGA6L6A8MZA4 724 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 K7ESM1 405 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 PPP1R12AO14974 1030 aaPredicted RBP17.92■□□□□ 0.46
CLK4-211ENST00000522556 DDX3YO15523 660 aaKnown RBP17.92■□□□□ 0.46
CLK4-211ENST00000522556 LZTS3O60299 673 aaPredicted RBP17.92■□□□□ 0.46
CLK4-211ENST00000522556 HEXIM1O94992 359 aaKnown RBP17.92■□□□□ 0.46
CLK4-211ENST00000522556 ELFN1P0C7U0 828 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 TGM2P21980 687 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 PTPN3P26045 913 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 PMLP29590 882 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 WASHC5Q12768 1159 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 EIF2B5Q13144 721 aaKnown RBP17.92■□□□□ 0.46
CLK4-211ENST00000522556 TFDP2Q14188 446 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 TRIP6Q15654 476 aaKnown RBP17.92■□□□□ 0.46
CLK4-211ENST00000522556 RALGPS1Q5JS13 557 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 DENND2CQ68D51 928 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 BBS12Q6ZW61 710 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 HSD11B1LQ7Z5J1 315 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 SLCO6A1Q86UG4 719 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 ZSCAN30Q86W11 494 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 RBFAQ8N0V3 343 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 PNPLA1Q8N8W4 532 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 RBM15Q96T37 977 aaKnown RBP eCLIP17.92■□□□□ 0.46
CLK4-211ENST00000522556 TOR4AQ9NXH8 423 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 OR1A2Q9Y585 309 aa17.92■□□□□ 0.46
CLK4-211ENST00000522556 SPTY2D1-AS1A0A0U1RR47 76 aa17.91■□□□□ 0.46
CLK4-211ENST00000522556 SCAMP1O15126 338 aa17.91■□□□□ 0.46
CLK4-211ENST00000522556 NEBLO76041 1014 aa17.91■□□□□ 0.46
CLK4-211ENST00000522556 ITGAVP06756 1048 aa17.91■□□□□ 0.46
CLK4-211ENST00000522556 ATXN1LP0C7T5 689 aaKnown RBP17.91■□□□□ 0.46
CLK4-211ENST00000522556 VIPR1P32241 457 aa17.91■□□□□ 0.46
CLK4-211ENST00000522556 CD68P34810 354 aaPredicted RBP17.91■□□□□ 0.46
CLK4-211ENST00000522556 ARRB1P49407 418 aaPredicted RBP17.91■□□□□ 0.46
CLK4-211ENST00000522556 FOXC1Q12948 553 aa17.91■□□□□ 0.46
CLK4-211ENST00000522556 LRRC14Q15048 493 aa17.91■□□□□ 0.46
CLK4-211ENST00000522556 LRRC8AQ8IWT6 810 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms