RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 PARGQ86W56 976 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 SRRDQ9UH36 339 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 PAIP2BQ9ULR5 123 aaKnown RBP16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 H3BNH8 94 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 SLC34A1Q06495 639 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 MAPKAPK3Q16644 382 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 TEX44Q53QW1 395 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 CAPN13Q6MZZ7 669 aaPredicted RBP16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 DQX1Q8TE96 717 aaKnown RBP16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 TBCDQ9BTW9 1192 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 POLMQ9NP87 494 aaPredicted RBP16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 CHKBQ9Y259 395 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 VWA7Q9Y334 891 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 FFAR3O14843 346 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 GPR42O15529 346 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 FAM20BO75063 409 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 ATG13O75143 517 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 CDH4P55283 916 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 MBTD1Q05BQ5 628 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 STX4Q12846 297 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 LSM12Q3MHD2 195 aaKnown RBP16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 CERS6Q6ZMG9 384 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 SLC26A9Q7LBE3 791 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 APTXQ7Z2E3 356 aaKnown RBP16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 ZDHHC13Q8IUH4 622 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 C1orf127Q8N9H9 656 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 HERVK_113Q902F9 699 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 LINGO1Q96FE5 620 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 S100A13Q99584 98 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 B3GNT5Q9BYG0 378 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 EFR3BQ9Y2G0 817 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 GLYATL1P3A0A0U1RQE8 302 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 CLOCKO15516 846 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 ERAL1O75616 437 aaKnown RBP16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 SLC20A2Q08357 652 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 FAAH2Q6GMR7 532 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 AADATQ8N5Z0 425 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 HNRNPABQ99729 332 aaKnown RBP16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 C9orf16Q9BUW7 83 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 COPG2Q9UBF2 871 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 SLC45A1Q9Y2W3 748 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 FSCN2O14926 492 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 NDST3O95803 873 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 LILRA4P59901 499 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 ECM1Q16610 540 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 OR52L1Q8NGH7 329 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 SNX27Q96L92 541 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 ACE2Q9BYF1 805 aaPredicted RBP16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 LEF1Q9UJU2 399 aaPredicted RBP16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 ZNF780BQ9Y6R6 833 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 PEX11AO75192 247 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 LRPAP1P30533 357 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 PTPN9P43378 593 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 SMIM11AP58511 58 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 JOSD2Q8TAC2 188 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 FNIP1Q8TF40 1166 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 RPS6KA6Q9UK32 745 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 TPRKBQ9Y3C4 175 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 ASB3Q9Y575 518 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 GPR25O00155 361 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 TRIM24O15164 1050 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 NR2F1P10589 423 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 TNFRSF8P28908 595 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 WASP42768 502 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 DRG2P55039 364 aaKnown RBP16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 TLE2Q04725 743 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 GRSF1Q12849 480 aaKnown RBP eCLIP16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 TSNQ15631 228 aaKnown RBP16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 CCDC92Q53HC0 331 aaPredicted RBP16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 CDYL2Q8N8U2 506 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 CLEC4DQ8WXI8 215 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 MAGEH1Q9H213 219 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 TRMT13Q9NUP7 481 aaKnown RBP16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 RBPJLQ9UBG7 517 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 STXBP5LQ9Y2K9 1186 aa16.3■□□□□ 0.2
PCDHA3-201ENST00000522353 PEX1O43933 1283 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 KRT33AO76009 404 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 ITGA2BP08514 1039 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 AADACL2Q6P093 401 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 TRAF7Q6Q0C0 670 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 ADHFE1Q8IWW8 467 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 TCAIMQ8N3R3 496 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 DLG3Q92796 817 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 POLR1BQ9H9Y6 1135 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 ELOVL2Q9NXB9 296 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 MRTO4Q9UKD2 239 aaKnown RBP16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 SMIM31A0A1B0GVY4 71 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 E9PAM4 449 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 H3BM21 787 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 SLC25A12O75746 678 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 POP4O95707 220 aaKnown RBP16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 CAP1Q01518 475 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 SNX30Q5VWJ9 437 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 OR6Y1Q8NGX8 325 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 PLD4Q96BZ4 506 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 FUBP3Q96I24 572 aaKnown RBP eCLIP16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 CDRT15Q96T59 188 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 ARHGEF4Q9NR80 690 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 RAI2Q9Y5P3 530 aa16.29■□□□□ 0.2
PCDHA3-201ENST00000522353 GTPBP1O00178 669 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms