RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 RNASEH1O60930 286 aaKnown RBP13.44□□□□□ -0.26
CLK4-210ENST00000522136 TRBC1P01850 177 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 SLC4A1P02730 911 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 GRIA4P48058 902 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 RPL26P61254 145 aaKnown RBP13.44□□□□□ -0.26
CLK4-210ENST00000522136 CBLBQ13191 982 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 PTPRCAPQ14761 206 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 SLMAPQ14BN4 828 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 CRY1Q16526 586 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 HSF5Q4G112 596 aaPredicted RBP13.44□□□□□ -0.26
CLK4-210ENST00000522136 TMPRSS6Q8IU80 811 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 PJA1Q8NG27 643 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 UHMK1Q8TAS1 419 aaKnown RBP13.44□□□□□ -0.26
CLK4-210ENST00000522136 STAMBPL1Q96FJ0 436 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 DKK3Q9UBP4 350 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 ZC3H7BQ9UGR2 993 aaKnown RBP13.44□□□□□ -0.26
CLK4-210ENST00000522136 RPL26L1Q9UNX3 145 aaKnown RBP13.44□□□□□ -0.26
CLK4-210ENST00000522136 ARL5AQ9Y689 179 aa13.44□□□□□ -0.26
CLK4-210ENST00000522136 NPIPB15A6NHN6 443 aaPredicted RBP13.43□□□□□ -0.26
CLK4-210ENST00000522136 C1QTNF3-AMACRE9PGA6 284 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 DCNP07585 359 aaKnown RBP13.43□□□□□ -0.26
CLK4-210ENST00000522136 ITGB7P26010 798 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 NMBRP28336 390 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 SSTR1P30872 391 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 GPX6P59796 221 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 FAM193AP78312 1265 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 SMAD1Q15797 465 aaKnown RBP13.43□□□□□ -0.26
CLK4-210ENST00000522136 PCID2Q5JVF3 399 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 ZNF776Q68DI1 518 aaPredicted RBP13.43□□□□□ -0.26
CLK4-210ENST00000522136 TSPAN33Q86UF1 283 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 RELL1Q8IUW5 271 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 SYNPOQ8N3V7 929 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 AADATQ8N5Z0 425 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 HNRNPLLQ8WVV9 542 aaKnown RBP13.43□□□□□ -0.26
CLK4-210ENST00000522136 EDAQ92838 391 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 LRRC39Q96DD0 335 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 SCRN2Q96FV2 425 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 PHACTR1Q9C0D0 580 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 LRRC4CQ9HCJ2 640 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 PCDH12Q9NPG4 1184 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 SAMD15Q9P1V8 674 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 SLC2A6Q9UGQ3 507 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 ITM2BQ9Y287 266 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 PPIL1Q9Y3C6 166 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 TCAF1Q9Y4C2 921 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 TECTAO75443 2155 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 NUMA1Q14980 2115 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 TCRBV21S2A2A0A5A6 115 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 CAPN8A6NHC0 703 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 GOLGA8CPA6NN73 597 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 UPK3BL1B0FP48 263 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 CHURC1-FNTBB4DL54 471 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 UPK3BL2E5RIL1 263 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 LDB2O43679 373 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 ACSL3O95573 720 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 ADRA1DP25100 572 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 DRD3P35462 400 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 POLR2LP62875 67 aaKnown RBP13.43□□□□□ -0.26
CLK4-210ENST00000522136 CNTN1Q12860 1018 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 UAP1Q16222 522 aaPredicted RBP13.43□□□□□ -0.26
CLK4-210ENST00000522136 FAM46CQ5VWP2 391 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 FBXL19Q6PCT2 694 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 UNC5AQ6ZN44 842 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 LYSMD3Q7Z3D4 306 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 GLT6D1Q7Z4J2 308 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 PALM2Q8IXS6 379 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 BRSK1Q8TDC3 778 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 UBLCP1Q8WVY7 318 aaPredicted RBP13.43□□□□□ -0.26
CLK4-210ENST00000522136 SPOCK2Q92563 424 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 EID2BQ96D98 161 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 MFSD3Q96ES6 412 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 FCRL3Q96P31 734 aaPredicted RBP13.43□□□□□ -0.26
CLK4-210ENST00000522136 KIFC1Q9BW19 673 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 EPB41L4BQ9H329 900 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 MAGEE1Q9HCI5 957 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 ARGLU1Q9NWB6 273 aaPredicted RBP13.43□□□□□ -0.26
CLK4-210ENST00000522136 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLK4-210ENST00000522136 B4GALT6Q9UBX8 382 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 SERGEFQ9UGK8 458 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 GGT7Q9UJ14 662 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 SOX13Q9UN79 622 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 SIT1Q9Y3P8 196 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 ZNF711Q9Y462 761 aa13.43□□□□□ -0.26
CLK4-210ENST00000522136 A0A1W2PP55 124 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 A0A1W2PQ67 120 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 CCL22O00626 93 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 CLDN7O95471 211 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 TTC4O95801 387 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 NDUFV2P19404 249 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 XPAP23025 273 aaPredicted RBP13.42□□□□□ -0.26
CLK4-210ENST00000522136 P2RY2P41231 377 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 SIGLEC14Q08ET2 396 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 CDKN3Q16667 212 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 ESRP1Q6NXG1 681 aaKnown RBP13.42□□□□□ -0.26
CLK4-210ENST00000522136 CRTC1Q6UUV9 634 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.42□□□□□ -0.26
CLK4-210ENST00000522136 CEP128Q6ZU80 1094 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 USP45Q70EL2 814 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 ERN2Q76MJ5 926 aaKnown RBP13.42□□□□□ -0.26
CLK4-210ENST00000522136 UNC5BQ8IZJ1 945 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms