RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PROCP04070 461 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 ABCB1P08183 1280 aaPredicted RBP16.26■□□□□ 0.19
USP42-207ENST00000521713 ETS1P14921 441 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 FLT3P36888 993 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 NUP62P37198 522 aaPredicted RBP16.26■□□□□ 0.19
USP42-207ENST00000521713 ZNF792Q3KQV3 632 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 ATAD3BQ5T9A4 648 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 RINLQ6ZS11 566 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 KREMEN2Q8NCW0 462 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 SCLYQ96I15 445 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 TRPC4Q9UBN4 977 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 NDOR1Q9UHB4 597 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 DUOX1Q9NRD9 1551 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 ANKDD1BA6NHY2 528 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 HMGB3O15347 200 aaKnown RBP16.26■□□□□ 0.19
USP42-207ENST00000521713 BAIAP3O94812 1187 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 GPR15P49685 360 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 RAB15P59190 212 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 MAXP61244 160 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 NR1D2Q14995 579 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 PTPRNQ16849 979 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 BROXQ5VW32 411 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 CNKSR3Q6P9H4 555 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 ATG16L2Q8NAA4 619 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 MRPL48Q96GC5 212 aaKnown RBP16.26■□□□□ 0.19
USP42-207ENST00000521713 CSPG4P5Q96PW8 444 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 SLC39A8Q9C0K1 460 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 MAPRE3Q9UPY8 281 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 INSL6Q9Y581 213 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 BUD23O43709 281 aaKnown RBP16.25■□□□□ 0.19
USP42-207ENST00000521713 FAM163BP0C2L3 166 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 ELFN1P0C7U0 828 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 TCF3P15923 654 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 HK2P52789 917 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 BLMHQ13867 455 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 HLA-DQA1Q5Y7H0 255 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 C10orf53Q8N6V4 93 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 OSBPL11Q9BXB4 747 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 RPS6KB2Q9UBS0 482 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 NDUFAF1Q9Y375 327 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 RGPD8O14715 1765 aaPredicted RBP16.25■□□□□ 0.19
USP42-207ENST00000521713 SNAP91O60641 907 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 TSC22D2O75157 780 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 ALOX12P18054 663 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 MAGEA10P43363 369 aaPredicted RBP16.25■□□□□ 0.19
USP42-207ENST00000521713 FBXW8Q8N3Y1 598 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 ACMSDQ8TDX5 336 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 TBC1D30Q9Y2I9 924 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 MRPS17Q9Y2R5 130 aaKnown RBP16.25■□□□□ 0.19
USP42-207ENST00000521713 TK2O00142 265 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 C8AP07357 584 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 VAV1P15498 845 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 FASTKQ14296 549 aaKnown RBP16.25■□□□□ 0.19
USP42-207ENST00000521713 ARCQ7LC44 396 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 AMER2Q8N7J2 671 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 GPR88Q9GZN0 384 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 PSME2Q9UL46 239 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 ZNF536O15090 1300 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 A0A1B0GVM2 712 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 TCAF2A6NFQ2 919 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 ZNF846Q147U1 533 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 TEX44Q53QW1 395 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 PMF1Q6P1K2 205 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 SNX32Q86XE0 403 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 NAT16Q8N8M0 369 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 MYO19Q96H55 970 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 MAGEB10Q96LZ2 347 aaPredicted RBP16.25■□□□□ 0.19
USP42-207ENST00000521713 ARMCX1Q9P291 453 aa16.25■□□□□ 0.19
USP42-207ENST00000521713 H0YC42 278 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 H7C0S8 307 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 L1CAMP32004 1257 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 NOMO1Q15155 1222 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 MAPK11Q15759 364 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 POM121L1PQ3SYA9 428 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 ADAMTSL2Q86TH1 951 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 C8orf59Q8N0T1 100 aaPredicted RBP16.24■□□□□ 0.19
USP42-207ENST00000521713 RBFAQ8N0V3 343 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 CFAP52Q8N1V2 620 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 PYDC1Q8WXC3 89 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 QKIQ96PU8 341 aaKnown RBP eCLIP16.24■□□□□ 0.19
USP42-207ENST00000521713 WDR12Q9GZL7 423 aaKnown RBP16.24■□□□□ 0.19
USP42-207ENST00000521713 MIR1-1HGQ9H1L0 117 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 POMKQ9H5K3 350 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 CLIC5Q9NZA1 410 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 FBXO5Q9UKT4 447 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 R3HDM2Q9Y2K5 976 aaKnown RBP16.24■□□□□ 0.19
USP42-207ENST00000521713 FAM187BQ17R55 369 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 ABRAXAS1Q6UWZ7 409 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 RBM44Q6ZP01 1051 aaKnown RBP16.24■□□□□ 0.19
USP42-207ENST00000521713 SFRP1Q8N474 314 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 PIWIL2Q8TC59 973 aaKnown RBP16.24■□□□□ 0.19
USP42-207ENST00000521713 SPRTNQ9H040 489 aaPredicted RBP16.24■□□□□ 0.19
USP42-207ENST00000521713 C8orf4Q9NR00 106 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 CRNNQ9UBG3 495 aaPredicted RBP16.24■□□□□ 0.19
USP42-207ENST00000521713 CIDEBQ9UHD4 219 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 MYBPHLA2RUH7 354 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 MEI4A8MW99 385 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 MDM4O15151 490 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 MT-CO1P00395 513 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 VAC14Q08AM6 782 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms