RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	ARHGAP24	Q8N264	748 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	NUDCD1	Q96RS6	583 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	UNK	Q9C0B0	810 aa	Known RBP	12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	GPAM	Q9HCL2	828 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	ACSS2	Q9NR19	701 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	ANAPC1	Q9H1A4	1944 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	SLCO1B7	G3V0H7	640 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	CD3EAP	O15446	510 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	ZBTB14	O43829	449 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	TSPAN3	O60637	253 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	TM7SF2	O76062	418 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	SNUPN	O95149	360 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	LATS1	O95835	1130 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	GLP2R	O95838	553 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	CD160	O95971	181 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	PRL	P01236	227 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	CCDC166	P0CW27	439 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	CES1	P23141	567 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	PSMA3	P25788	255 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	SERPINB5	P36952	375 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	SCNN1B	P51168	640 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	CCNG1	P51959	295 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	DEFB103A	P81534	67 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	ARF5	P84085	180 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	ACAP2	Q15057	778 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	ACCSL	Q4AC99	568 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	KHDC1	Q4VXA5	237 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	SEL1L3	Q68CR1	1132 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	FAM45BP	Q6NSW5	357 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	TMEM207	Q6UWW9	146 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	ZNF783	Q6ZMS7	281 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	PIWIL4	Q7Z3Z4	852 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	DDX53	Q86TM3	631 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	SPNS2	Q8IVW8	549 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	OR13C4	Q8NGS5	318 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	FAM45A	Q8TCE6	357 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	AGR3	Q8TD06	166 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	ANKRD49	Q8WVL7	239 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	SCG3	Q8WXD2	468 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	OR52B2	Q96RD2	323 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	DDX50	Q9BQ39	737 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	TDRD1	Q9BXT4	1180 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	TCF7L2	Q9NQB0	619 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	MAN1C1	Q9NR34	630 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	TMEM39A	Q9NV64	488 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	NCKIPSD	Q9NZQ3	722 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	VTI1B	Q9UEU0	232 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	CORO1C	Q9ULV4	474 aa	Predicted RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	SPO11	Q9Y5K1	396 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	PLXNA4	Q9HCM2	1894 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	GFRA2	O00451	464 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	BUD23	O43709	281 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	GREM1	O60565	184 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	OLFM2	O95897	454 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	LMNA	P02545	664 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	UROD	P06132	367 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	RBP1	P09455	135 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	PIRT	P0C851	137 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	IRF1	P10914	325 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	LAG3	P18627	525 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	GNAZ	P19086	355 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	OGN	P20774	298 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	FDXR	P22570	491 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	SUOX	P51687	545 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	ZNF140	P52738	457 aa	Predicted RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	SEMA3A	Q14563	771 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	KPNB1	Q14974	876 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	ACSBG2	Q5FVE4	666 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	FSCB	Q5H9T9	825 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	RNF219	Q5W0B1	726 aa	Predicted RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	MRNIP	Q6NTE8	343 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	KLC3	Q6P597	504 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	ZNF549	Q6P9A3	640 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	TRIM67	Q6ZTA4	783 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	HERC6	Q8IVU3	1022 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	CMTR2	Q8IYT2	770 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	PHTF2	Q8N3S3	785 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	KDM1B	Q8NB78	822 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	CFAP61	Q8NHU2	1237 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	DIS3L	Q8TF46	1054 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	WDR60	Q8WVS4	1066 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	CDKN2AIPNL	Q96HQ2	116 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	CNDP1	Q96KN2	507 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	EXOC2	Q96KP1	924 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	SLC22A12	Q96S37	553 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	DCLRE1B	Q9H816	532 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	NLE1	Q9NVX2	485 aa	Predicted RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	SPG21	Q9NZD8	308 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	ATP11B	Q9Y2G3	1177 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	INSL5	Q9Y5Q6	135 aa		12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.41	□□□□□ -0.42
SPIDR-210	ENST00000519362	NEMP2	A6NFY4	417 aa		12.4	□□□□□ -0.42
SPIDR-210	ENST00000519362	CBX4	O00257	560 aa		12.4	□□□□□ -0.42
SPIDR-210	ENST00000519362	PRRG1	O14668	218 aa		12.4	□□□□□ -0.42
SPIDR-210	ENST00000519362	ZMPSTE24	O75844	475 aa		12.4	□□□□□ -0.42
SPIDR-210	ENST00000519362	CRTAM	O95727	393 aa		12.4	□□□□□ -0.42
SPIDR-210	ENST00000519362	C1R	P00736	705 aa		12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms