RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 DMC1Q14565 340 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 SSPNQ14714 243 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 TAB1Q15750 504 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 TAF12Q16514 161 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 PTPN21Q16825 1174 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 DGUOKQ16854 277 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 ASTE1Q2TB18 679 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 LRIT3Q3SXY7 679 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 TEX30Q5JUR7 227 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 MPP7Q5T2T1 576 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 PXDC1Q5TGL8 231 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 AADACL4Q5VUY2 407 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 KANK2Q63ZY3 851 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 DCAF15Q66K64 600 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 SULT1C3Q6IMI6 304 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 CGB2Q6NT52 195 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 FAM180BQ6P0A1 224 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 PRMT9Q6P2P2 845 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 USP50Q70EL3 339 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 CREB3L2Q70SY1 520 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 KRT74Q7RTS7 529 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 DSG4Q86SJ6 1040 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 NLRX1Q86UT6 975 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 KBTBD6Q86V97 674 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 LIX1LQ8IVB5 337 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 C7orf61Q8IZ16 206 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 TAB3Q8N5C8 712 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 DPP10Q8N608 796 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 TDRD5Q8NAT2 981 aaKnown RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 DAGLBQ8NCG7 672 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 PIK3C3Q8NEB9 887 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 OR7D4Q8NG98 312 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 OR5H6Q8NGV6 325 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 OR6S1Q8NH40 331 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 ART4Q93070 314 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 PHF21AQ96BD5 680 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 LRRC39Q96DD0 335 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 SH3YL1Q96HL8 342 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 OXNAD1Q96HP4 312 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 EXOC2Q96KP1 924 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 TSGA13Q96PP4 275 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 WRNIP1Q96S55 665 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC29A1Q99808 456 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 APOL4Q9BPW4 351 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 PACSIN1Q9BY11 444 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF341Q9BYN7 854 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC2A11Q9BYW1 496 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 MTFR1LQ9H019 292 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 LMAN2LQ9H0V9 348 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 NOL6Q9H6R4 1146 aaKnown RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 RPF2Q9H7B2 306 aaKnown RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 ATP13A3Q9H7F0 1226 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 MANSC1Q9H8J5 431 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 TM9SF3Q9HD45 589 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 IFT46Q9NQC8 304 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 STARD7Q9NQZ5 370 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 SH3GLB2Q9NR46 395 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 INTS7Q9NVH2 962 aaKnown RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 POLR3BQ9NW08 1133 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 MAT2BQ9NZL9 334 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 ACTR3BQ9P1U1 418 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 CEP72Q9P209 647 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARHGAP20Q9P2F6 1191 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 MALT1Q9UDY8 824 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 PFDN2Q9UHV9 154 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC24A2Q9UI40 661 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 ITGA11Q9UKX5 1188 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 ACSL5Q9ULC5 683 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 CNOT6Q9ULM6 557 aaKnown RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 SPATA2Q9UM82 520 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 PRPF19Q9UMS4 504 aaKnown RBP4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 MED16Q9Y2X0 877 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 DERAQ9Y315 318 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 PRELID3BQ9Y3B1 194 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 KCTD3Q9Y597 815 aa4.84□□□□□ -1.63
HMGB1P19-201ENST00000517578 COL3A1P02461 1466 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 MRC2Q9UBG0 1479 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 LTBP3Q9NS15 1303 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 CYP2D7A0A087X1C5 515 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 NPHP3-ACAD11A0A0J9YXS1 232 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 PNMA8CA0A1B0GUJ8 204 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 LINC00862A6NCI5 91 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 TRIM75PA6NK02 468 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 LRRC53A6NM62 1247 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 KLRF2D3W0D1 207 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 H3BMQ9 156 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 H3BUI4 141 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 K7ENM7 598 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 EYA2O00167 538 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 FCHO1O14526 889 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 KLF11O14901 512 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 PLD2O14939 933 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 TFECO14948 347 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 ATP2A1O14983 1001 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 STX7O15400 261 aaKnown RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SIGLEC6O43699 453 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SPOPO43791 374 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 ATG13O75143 517 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 PTP4A3O75365 173 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms