RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 DCAF4L2Q8NA75 395 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 TSTD1Q8NFU3 115 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 EXD1Q8NHP7 514 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 DNAJB8Q8NHS0 232 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 FAM71BQ8TC56 605 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 HMGB4Q8WW32 186 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 MRGPRX3Q96LB0 322 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 RNF157Q96PX1 679 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ALS2CR12Q96Q35 445 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 PSMB7Q99436 277 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 GABRG3Q99928 467 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ZNF670Q9BS34 389 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 HEMGNQ9BXL5 484 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 NOL6Q9H6R4 1146 aaKnown RBP5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 LRRC19Q9H756 370 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 SP110Q9HB58 689 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 GP6Q9HCN6 339 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ETNK2Q9NVF9 386 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 WHRNQ9P202 907 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 BCCIPQ9P287 314 aaKnown RBP eCLIP5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 RCOR3Q9P2K3 495 aaPredicted RBP5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 IPO11Q9UI26 975 aaKnown RBP5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 VPS51Q9UID3 782 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 PYCARDQ9ULZ3 195 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 MMP17Q9ULZ9 603 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 MAPRE3Q9UPY8 281 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 NEU3Q9UQ49 428 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 MFHAS1Q9Y4C4 1052 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 HEY1Q9Y5J3 304 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 CAPN6Q9Y6Q1 641 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ZDBF2Q9HCK1 2354 aa5.9□□□□□ -1.46
SCARNA6.1-201ENST00000516989 MYO18AQ92614 2054 aaKnown RBP5.9□□□□□ -1.47
SCARNA6.1-201ENST00000516989 BDP1A6H8Y1 2624 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 EDDM13A0A1B0GTR0 161 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 A0A1W2PQF6 199 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TARSL2A2RTX5 802 aaKnown RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZSCAN5CA6NGD5 496 aaPredicted RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 C3orf70A6NLC5 250 aaPredicted RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MIF4GDA9UHW6 222 aaKnown RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 H0Y858 1186 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 J3KR12 359 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SHOXO15266 292 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SMAD6O43541 496 aaKnown RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KIF5CO60282 957 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CST8O60676 142 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RNASEH1O60930 286 aaKnown RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZMPSTE24O75844 475 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 APBB3O95704 486 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PYGMP11217 842 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SRCP12931 536 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 VAV1P15498 845 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZFXP17010 805 aaPredicted RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CTNNA2P26232 953 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CTNNA1P35221 906 aaKnown RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CDKN2BP42772 138 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RECQLP46063 649 aaPredicted RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FNTBP49356 437 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SERPINH1P50454 418 aaKnown RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GEMIN4P57678 1058 aaKnown RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RNF4P78317 190 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GBE1Q04446 702 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TFDP2Q14188 446 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HNRNPA1L2Q32P51 320 aaKnown RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TFDP3Q5H9I0 405 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZNF569Q5MCW4 686 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ANKRD34AQ69YU3 496 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KIAA1324Q6UXG2 1013 aaKnown RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SPOCD1Q6ZMY3 1216 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CDH24Q86UP0 819 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 VSIG1Q86XK7 387 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CACUL1Q86Y37 369 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TMPRSS6Q8IU80 811 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ARHGAP12Q8IWW6 846 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 AGGF1Q8N302 714 aaeCLIP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SH2D3CQ8N5H7 860 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NPWQ8N729 165 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KDM1BQ8NB78 822 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CCNYQ8ND76 341 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ADCY4Q8NFM4 1077 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TRIM58Q8NG06 486 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 OR2T3Q8NH03 318 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GANCQ8TET4 914 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NSMCE1Q8WV22 266 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ATOH1Q92858 354 aaPredicted RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FAF2Q96CS3 445 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SIPA1Q96FS4 1042 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RCC1LQ96I51 464 aaKnown RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RBM41Q96IZ5 413 aaKnown RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MIPEPQ99797 713 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PRRX2Q99811 253 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KLC2Q9H0B6 622 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TMEM245Q9H330 911 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PRDM16Q9HAZ2 1276 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PRSS16Q9NQE7 514 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 INTS7Q9NVH2 962 aaKnown RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 UBA2Q9UBT2 640 aaPredicted RBP5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FBXO4Q9UKT5 387 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 EMC9Q9Y3B6 208 aa5.89□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CACNA1IQ9P0X4 2223 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms