RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 PAF1Q8N7H5 531 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 OR13H1Q8NG92 308 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 TEKT5Q96M29 485 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 AGAP3Q96P47 875 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 ELF4Q99607 663 aaPredicted RBP11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 MYOCQ99972 504 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 WRAP53Q9BUR4 548 aaKnown RBP11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 GDF3Q9NR23 364 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 FNDC3AQ9Y2H6 1198 aaKnown RBP11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 PCDHGB2Q9Y5G2 931 aa11.21□□□□□ -0.61
SCARNA20-201ENST00000516768 PCNX2A6NKB5 2137 aa11.21□□□□□ -0.62
SCARNA20-201ENST00000516768 SHROOM3Q8TF72 1996 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 A0A1B0GTQ1 180 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 A8MX80 341 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 TOR1BO14657 336 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 THEGLP0DJG4 465 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 C6P13671 934 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 CEACAM1P13688 526 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 NFKBIAP25963 317 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 PTPN3P26045 913 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 PFN3P60673 137 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 RPL26P61254 145 aaKnown RBP11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 SKOR1P84550 965 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 SEMG2Q02383 582 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 WASHC5Q12768 1159 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 RALGDSQ12967 914 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 LRRC14Q15048 493 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 NOMO1Q15155 1222 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 SHBQ15464 509 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 WSCD2Q2TBF2 565 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 FAM182AQ5T1J6 154 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 MEI1Q5TIA1 1274 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 DPPA4Q7L190 304 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 ERMP1Q7Z2K6 904 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 NDUFAF2Q8N183 169 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 TP53I13Q8NBR0 393 aaPredicted RBP11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 DENND6BQ8NEG7 585 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 TADA1Q96BN2 335 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 IMP4Q96G21 291 aaKnown RBP11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 MCCC1Q96RQ3 725 aaPredicted RBP11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 VAT1Q99536 393 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 C1QTNF7Q9BXJ2 289 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 SLC25A51Q9H1U9 297 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 LZTFL1Q9NQ48 299 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 MBNL1Q9NR56 388 aaKnown RBP11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 GPR27Q9NS67 375 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 SEPT10Q9P0V9 454 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 RPL26L1Q9UNX3 145 aaKnown RBP11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 CHKBQ9Y259 395 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 PPP2R2CQ9Y2T4 447 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 COQ6Q9Y2Z9 468 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 TTLL3Q9Y4R7 772 aa11.2□□□□□ -0.62
SCARNA20-201ENST00000516768 SPTY2D1-AS1A0A0U1RR47 76 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 A6NNZ2 444 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 ANKRD66B4E2M5 251 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 SH3BP5O60239 455 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 LZTS3O60299 673 aaPredicted RBP11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 RECQL5O94762 991 aaPredicted RBP11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 KCNK5O95279 499 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 CPP00450 1065 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 GM2AP17900 193 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 CA4P22748 312 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 CD68P34810 354 aaPredicted RBP11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 HNF1BP35680 557 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 CD86P42081 329 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 RABIFP47224 123 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 ARRB1P49407 418 aaPredicted RBP11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 YPEL5P62699 121 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 OTUD4Q01804 1114 aaKnown RBP11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 BNIP3Q12983 259 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 ZNF211Q13398 564 aaPredicted RBP11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 PTPRRQ15256 657 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 CCDC181Q5TID7 509 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 KYAT3Q6YP21 454 aaKnown RBP11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 PID1Q7Z2X4 250 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 OXR1Q8N573 874 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 ACTL9Q8TC94 416 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 HTR3CQ8WXA8 447 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 ANP32BQ92688 251 aaKnown RBP11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 HAUS1Q96CS2 278 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 IFT43Q96FT9 208 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 PDLIM2Q96JY6 352 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 COQ10AQ96MF6 247 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 RBM15Q96T37 977 aaKnown RBP eCLIP11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 TDRD1Q9BXT4 1180 aaKnown RBP11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 CEP41Q9BYV8 373 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 SLC32A1Q9H598 525 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 GLOD4Q9HC38 313 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 PCDH9Q9HC56 1237 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 B4GALT6Q9UBX8 382 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 TRHDEQ9UKU6 1024 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 PLXNA2O75051 1894 aa11.19□□□□□ -0.62
SCARNA20-201ENST00000516768 CNOT1A5YKK6 2376 aaKnown RBP11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 A0A0J9YYE9 177 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 NPIPB15A6NHN6 443 aaPredicted RBP11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 H7C0C1 242 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 YKT6O15498 198 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 CBFA2T3O75081 653 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 HEXIM1O94992 359 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms