RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 LHX6Q9UPM6 363 aa17.77■□□□□ 0.44
SFXN1-212ENST00000515791 OR1A2Q9Y585 309 aa17.77■□□□□ 0.44
SFXN1-212ENST00000515791 PCDHGC4Q9Y5F7 938 aa17.77■□□□□ 0.44
SFXN1-212ENST00000515791 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.77■□□□□ 0.44
SFXN1-212ENST00000515791 ASXL3Q9C0F0 2248 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 TMEM110-MUSTN1A8MSY1 372 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 YY2O15391 372 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 TLX3O43711 291 aaPredicted RBP17.76■□□□□ 0.43
SFXN1-212ENST00000515791 SOCS5O75159 536 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 RECQL5O94762 991 aaPredicted RBP17.76■□□□□ 0.43
SFXN1-212ENST00000515791 PROSCO94903 275 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 TRIM23P36406 574 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 HSPA9P38646 679 aaKnown RBP17.76■□□□□ 0.43
SFXN1-212ENST00000515791 HK3P52790 923 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 ADKP55263 362 aaKnown RBP17.76■□□□□ 0.43
SFXN1-212ENST00000515791 CDH6P55285 790 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 TAS2R40P59535 323 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 PPARDQ03181 441 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 TRAF2Q12933 501 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 MTM1Q13496 603 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 PAFAH1B3Q15102 231 aaKnown RBP17.76■□□□□ 0.43
SFXN1-212ENST00000515791 C6orf132Q5T0Z8 1188 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 NCBP2-AS2Q69YL0 99 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 GUSBP11Q6P575 273 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 C19orf48Q6RUI8 117 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 SLC35F3Q8IY50 421 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 PCDH19Q8TAB3 1148 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 IFI44Q8TCB0 444 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 TSACCQ96A04 125 aaPredicted RBP17.76■□□□□ 0.43
SFXN1-212ENST00000515791 NXPE2Q96DL1 559 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 B4GALT6Q9UBX8 382 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 PCDHB1Q9Y5F3 818 aa17.76■□□□□ 0.43
SFXN1-212ENST00000515791 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.75■□□□□ 0.43
SFXN1-212ENST00000515791 CASC3O15234 703 aaKnown RBP17.75■□□□□ 0.43
SFXN1-212ENST00000515791 TGM2P21980 687 aa17.75■□□□□ 0.43
SFXN1-212ENST00000515791 DUSP3P51452 185 aaPredicted RBP17.75■□□□□ 0.43
SFXN1-212ENST00000515791 POLR2LP62875 67 aaKnown RBP17.75■□□□□ 0.43
SFXN1-212ENST00000515791 CDKN3Q16667 212 aa17.75■□□□□ 0.43
SFXN1-212ENST00000515791 COL28A1Q2UY09 1125 aa17.75■□□□□ 0.43
SFXN1-212ENST00000515791 SKOR2Q2VWA4 1001 aaPredicted RBP17.75■□□□□ 0.43
SFXN1-212ENST00000515791 CFAP58Q5T655 872 aa17.75■□□□□ 0.43
SFXN1-212ENST00000515791 FAXCQ5TGI0 409 aa17.75■□□□□ 0.43
SFXN1-212ENST00000515791 SPECC1LQ69YQ0 1117 aa17.75■□□□□ 0.43
SFXN1-212ENST00000515791 FAF2Q96CS3 445 aa17.75■□□□□ 0.43
SFXN1-212ENST00000515791 COQ10AQ96MF6 247 aa17.75■□□□□ 0.43
SFXN1-212ENST00000515791 UVRAGQ9P2Y5 699 aa17.75■□□□□ 0.43
SFXN1-212ENST00000515791 PPIL1Q9Y3C6 166 aa17.75■□□□□ 0.43
SFXN1-212ENST00000515791 SHROOM3Q8TF72 1996 aa17.75■□□□□ 0.43
SFXN1-212ENST00000515791 URB1O60287 2271 aaKnown RBP17.74■□□□□ 0.43
SFXN1-212ENST00000515791 SSU72P8A0A1W2PR75 194 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 TMEM202A6NGA9 273 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 A8MX80 341 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 MFSD11O43934 449 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 FZD6O60353 706 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 PCCBP05166 539 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 HOXC4P09017 264 aaPredicted RBP17.74■□□□□ 0.43
SFXN1-212ENST00000515791 H2AFZP0C0S5 128 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 ELFN1P0C7U0 828 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 LHCGRP22888 699 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 SERPINB6P35237 376 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 MAXP61244 160 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 GALNT2Q10471 571 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 ZNF235Q14590 738 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 PTPRRQ15256 657 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 CNGA3Q16281 694 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 PERM1Q5SV97 790 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 MARC1Q5VT66 337 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 ENPP7Q6UWV6 458 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 H2AFVQ71UI9 128 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 VSTM4Q8IW00 320 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 ATPAF2Q8N5M1 289 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 OR8K1Q8NGG5 319 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 MAML1Q92585 1016 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 CHP1Q99653 195 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 IL12RB2Q99665 862 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 SLC13A1Q9BZW2 595 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 NCKIPSDQ9NZQ3 722 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 DGKBQ9Y6T7 804 aa17.74■□□□□ 0.43
SFXN1-212ENST00000515791 A0A1W2PNU3 283 aaPredicted RBP17.73■□□□□ 0.43
SFXN1-212ENST00000515791 A0A1W2PQ67 120 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 GARSP41250 739 aaKnown RBP17.73■□□□□ 0.43
SFXN1-212ENST00000515791 MMP13P45452 471 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 KIAA1024LP59773 190 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 SRP54P61011 504 aaKnown RBP17.73■□□□□ 0.43
SFXN1-212ENST00000515791 KRT81Q14533 505 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 HADHQ16836 314 aaKnown RBP17.73■□□□□ 0.43
SFXN1-212ENST00000515791 ANKRD20A8PQ5CZ79 823 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 RALGPS1Q5JS13 557 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 ALG1LQ6GMV1 187 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 ESRP1Q6NXG1 681 aaKnown RBP17.73■□□□□ 0.43
SFXN1-212ENST00000515791 EFL1Q7Z2Z2 1120 aaKnown RBP17.73■□□□□ 0.43
SFXN1-212ENST00000515791 LRRC49Q8IUZ0 686 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 PQLC3Q8N755 202 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 HNRNPLLQ8WVV9 542 aaKnown RBP17.73■□□□□ 0.43
SFXN1-212ENST00000515791 PIH1D2Q8WWB5 315 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 OR1E3Q8WZA6 343 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 FATE1Q969F0 183 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 PDXPQ96GD0 296 aa17.73■□□□□ 0.43
SFXN1-212ENST00000515791 MCCC1Q96RQ3 725 aaPredicted RBP17.73■□□□□ 0.43
SFXN1-212ENST00000515791 ZNF670Q9BS34 389 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms