RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 EPHX3Q9H6B9 360 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 MVB12BQ9H7P6 319 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 NKIRAS2Q9NYR9 191 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 AASSQ9UDR5 926 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 ERRFI1Q9UJM3 462 aaPredicted RBP3.37□□□□□ -1.87
HERC4-215ENST00000515753 AGO1Q9UL18 857 aaKnown RBP3.37□□□□□ -1.87
HERC4-215ENST00000515753 GLI2P10070 1586 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 ERCC6L2Q5T890 1561 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 KDM6BO15054 1643 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 KDM5BQ9UGL1 1544 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 PGPEP1LA6NFU8 196 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 PEX12O00623 359 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 KLK10O43240 276 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 LIASO43766 372 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 PLOD3O60568 738 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 ZNF432O94892 652 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 RTN3O95197 1032 aaPredicted RBP3.36□□□□□ -1.87
HERC4-215ENST00000515753 CBX6O95503 412 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 IL1AP01583 271 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 RPN1P04843 607 aaKnown RBP3.36□□□□□ -1.87
HERC4-215ENST00000515753 NAGAP17050 411 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 CHMP24386 653 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 PSMC2P35998 433 aaKnown RBP3.36□□□□□ -1.87
HERC4-215ENST00000515753 CCR5P51681 352 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 ARSFP54793 590 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 TMPRSS3P57727 454 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 DSCR9P59020 149 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 SEC61A1P61619 476 aaKnown RBP3.36□□□□□ -1.87
HERC4-215ENST00000515753 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.36□□□□□ -1.87
HERC4-215ENST00000515753 SLC12A1Q13621 1099 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 MEA1Q16626 185 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 PLEKHO1Q53GL0 409 aaPredicted RBP3.36□□□□□ -1.87
HERC4-215ENST00000515753 SLC45A4Q5BKX6 768 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 PRAMEF19Q5SWL8 479 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 ATG9BQ674R7 924 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 IL20RBQ6UXL0 311 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 MON1BQ7L1V2 547 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 PRSS45Q7RTY3 260 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 GALNT5Q7Z7M9 940 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 GHDCQ8N2G8 530 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 CLIP4Q8N3C7 705 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 LSMEM1Q8N8F7 131 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 ADAMTS14Q8WXS8 1223 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 ST8SIA4Q92187 359 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 HSPH1Q92598 858 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 CNOT9Q92600 299 aaKnown RBP3.36□□□□□ -1.87
HERC4-215ENST00000515753 RNF183Q96D59 192 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 GFM1Q96RP9 751 aaKnown RBP3.36□□□□□ -1.87
HERC4-215ENST00000515753 BARD1Q99728 777 aaKnown RBP3.36□□□□□ -1.87
HERC4-215ENST00000515753 SEZ6LQ9BYH1 1024 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 AGXT2Q9BYV1 514 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 NPFFR1Q9GZQ6 430 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 RSPH9Q9H1X1 276 aaPredicted RBP3.36□□□□□ -1.87
HERC4-215ENST00000515753 CCDC68Q9H2F9 335 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 PRKRIP1Q9H875 184 aaPredicted RBP3.36□□□□□ -1.87
HERC4-215ENST00000515753 SPATS2LQ9NUQ6 558 aaKnown RBP3.36□□□□□ -1.87
HERC4-215ENST00000515753 ANKRD10Q9NXR5 420 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 ORC3Q9UBD5 711 aaPredicted RBP3.36□□□□□ -1.87
HERC4-215ENST00000515753 TBX20Q9UMR3 447 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 CD109Q6YHK3 1445 aa3.36□□□□□ -1.87
HERC4-215ENST00000515753 RAPGEF2Q9Y4G8 1499 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 EPRSP07814 1512 aaKnown RBP3.35□□□□□ -1.87
HERC4-215ENST00000515753 MAGI3Q5TCQ9 1506 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 DIP2BQ9P265 1576 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 BIVM-ERCC5R4GMW8 1640 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 WNT9BO14905 357 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 PER2O15055 1255 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 USO1O60763 962 aaKnown RBP3.35□□□□□ -1.87
HERC4-215ENST00000515753 PTPN2P17706 415 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 RYKP34925 604 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 PMS2P54278 862 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 GAS1P54826 345 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 DRG2P55039 364 aaKnown RBP3.35□□□□□ -1.87
HERC4-215ENST00000515753 CASP6P55212 293 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 ATG16L1Q676U5 607 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.35□□□□□ -1.87
HERC4-215ENST00000515753 PALB2Q86YC2 1186 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 SFTPA2Q8IWL1 248 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 CPXM2Q8N436 756 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 NKAIN3Q8N8D7 197 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 NEXN-AS1Q8NBZ9 246 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 TDRD7Q8NHU6 1098 aaKnown RBP3.35□□□□□ -1.87
HERC4-215ENST00000515753 TBC1D22AQ8WUA7 517 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 ATOH1Q92858 354 aaPredicted RBP3.35□□□□□ -1.87
HERC4-215ENST00000515753 HVCN1Q96D96 273 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 RRP36Q96EU6 259 aaKnown RBP3.35□□□□□ -1.87
HERC4-215ENST00000515753 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.35□□□□□ -1.87
HERC4-215ENST00000515753 GPR63Q9BZJ6 419 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 PAIP1Q9H074 479 aaKnown RBP3.35□□□□□ -1.87
HERC4-215ENST00000515753 CLK4Q9HAZ1 481 aaKnown RBP3.35□□□□□ -1.87
HERC4-215ENST00000515753 ICAM5Q9UMF0 924 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 ARHGAP26Q9UNA1 814 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 GPR34Q9UPC5 381 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 SCN5AQ14524 2016 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 PBRM1Q86U86 1689 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 ADGRF5Q8IZF2 1346 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 DOCK7Q96N67 2140 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 ADGRL1O94910 1474 aa3.35□□□□□ -1.87
HERC4-215ENST00000515753 RUSC2Q8N2Y8 1516 aa3.34□□□□□ -1.87
HERC4-215ENST00000515753 A0A1W2PPH5 198 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms