RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 NAA25Q14CX7 972 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 PPP6R3Q5H9R7 873 aaPredicted RBP3.94□□□□□ -1.78
LINC01088-211ENST00000515597 WDR45BQ5MNZ6 344 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 UNQ6126/PRO20091Q6UXV3 157 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 LDHAL6AQ6ZMR3 332 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 TUBA1AQ71U36 451 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 TBC1D26Q86UD7 250 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 ZC3HC1Q86WB0 502 aaKnown RBP3.94□□□□□ -1.78
LINC01088-211ENST00000515597 PARP16Q8N5Y8 322 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 GJC3Q8NFK1 279 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 STAMQ92783 540 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 TUBA1CQ9BQE3 449 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 UBTD1Q9HAC8 227 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 SLC9A2Q9UBY0 812 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 NFE2L3Q9Y4A8 694 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 PCDHAC2Q9Y5I4 1007 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 HMGXB3Q12766 1538 aa3.94□□□□□ -1.78
LINC01088-211ENST00000515597 TAF1P21675 1872 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 GOLGA6L10A0A0M3HER8 536 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 KDM4BO94953 1096 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 CLDN14O95500 239 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 SERPINB2P05120 415 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 LINC00271P0C7V0 271 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 DGKAP23743 735 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 CLDN2P57739 230 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 BRWD1-AS2P59051 145 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 SLC12A1Q13621 1099 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 ARHGEF6Q15052 776 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 OASLQ15646 514 aaKnown RBP3.93□□□□□ -1.78
LINC01088-211ENST00000515597 EFNB3Q15768 340 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 CES5AQ6NT32 575 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 ADGRG6Q86SQ4 1221 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 FAM160B2Q86V87 743 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 CD101Q93033 1021 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 ERGIC1Q969X5 290 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 UHRF2Q96PU4 802 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 EYA3Q99504 573 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 EVA1AQ9H8M9 152 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 SMYD2Q9NRG4 433 aa3.93□□□□□ -1.78
LINC01088-211ENST00000515597 URB2Q14146 1524 aaKnown RBP3.93□□□□□ -1.78
LINC01088-211ENST00000515597 GREB1LQ9C091 1923 aaPredicted RBP3.93□□□□□ -1.78
LINC01088-211ENST00000515597 ZCCHC6Q5VYS8 1495 aaKnown RBP3.92□□□□□ -1.78
LINC01088-211ENST00000515597 DCAF1Q9Y4B6 1507 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 IGHV4OR15-8A0A075B7B6 117 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 ZIC3O60481 467 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 ZG16O60844 167 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 CD58P19256 250 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 HNRNPH1P31943 449 aaKnown RBP3.92□□□□□ -1.78
LINC01088-211ENST00000515597 GPD2P43304 727 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 CRIP2P52943 208 aaPredicted RBP3.92□□□□□ -1.78
LINC01088-211ENST00000515597 TROAPQ12815 778 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 ZNF155Q12901 538 aaPredicted RBP3.92□□□□□ -1.78
LINC01088-211ENST00000515597 BIRC3Q13489 604 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 TNFAIP1Q13829 316 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 RBBP5Q15291 538 aaKnown RBP3.92□□□□□ -1.78
LINC01088-211ENST00000515597 TAF12Q16514 161 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 AMZ1Q400G9 498 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 ATP13A5Q4VNC0 1218 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 SERTAD4-AS1Q5TG53 156 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 PMS2CLQ68D20 193 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.92□□□□□ -1.78
LINC01088-211ENST00000515597 SMC5Q8IY18 1101 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 IL17RCQ8NAC3 791 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 TNIP2Q8NFZ5 429 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 CREB3L4Q8TEY5 395 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 HERVK_113Q902F9 699 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 ELP4Q96EB1 424 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 ZC3HAV1LQ96H79 300 aaKnown RBP3.92□□□□□ -1.78
LINC01088-211ENST00000515597 PGLYRP2Q96PD5 576 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 MXRA8Q9BRK3 442 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 NOX4Q9NPH5 578 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 ZNF224Q9NZL3 707 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 KIAA1456Q9P272 454 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.92□□□□□ -1.78
LINC01088-211ENST00000515597 SIX4Q9UIU6 781 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 CDC14AQ9UNH5 594 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 CARD8Q9Y2G2 431 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.92□□□□□ -1.78
LINC01088-211ENST00000515597 GPR52Q9Y2T5 361 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 ADAM18Q9Y3Q7 739 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 SNX9Q9Y5X1 595 aa3.92□□□□□ -1.78
LINC01088-211ENST00000515597 HNRNPCL2B2RXH8 293 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 TEX22C9J3V5 150 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 NDUFS7O75251 213 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 MTA2O94776 668 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 SRCP12931 536 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 CHRNDQ07001 517 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 ZNF667Q5HYK9 610 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 GORABQ5T7V8 394 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 ATG16L1Q676U5 607 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 FAM122CQ6P4D5 195 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 ZNF354CQ86Y25 554 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 TMTC1Q8IUR5 882 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 KIAA2013Q8IYS2 634 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 CPXCR1Q8N123 301 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 ZNF441Q8N8Z8 693 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 SPATA22Q8NHS9 363 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 LNX1Q8TBB1 728 aaPredicted RBP3.91□□□□□ -1.78
LINC01088-211ENST00000515597 RUFY2Q8WXA3 655 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms