RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 STBD1O95210 358 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 NADKO95544 446 aaPredicted RBP12.87□□□□□ -0.35
SMAD1-215ENST00000515385 ITGBL1O95965 494 aaPredicted RBP12.87□□□□□ -0.35
SMAD1-215ENST00000515385 PTTG1O95997 202 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 PRKACBP22694 351 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 ELK4P28324 431 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 ETV3P41162 512 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 CASP3P42574 277 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 NR4A2P43354 598 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 CRKP46108 304 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 C15orf59Q2T9L4 293 aaPredicted RBP12.87□□□□□ -0.35
SMAD1-215ENST00000515385 PRSS48Q7RTY5 328 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 C8orf59Q8N0T1 100 aaPredicted RBP12.87□□□□□ -0.35
SMAD1-215ENST00000515385 RHOXF1Q8NHV9 184 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 VPS39Q96JC1 886 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 ZBTB45Q96K62 511 aaPredicted RBP12.87□□□□□ -0.35
SMAD1-215ENST00000515385 EGLN2Q96KS0 407 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 DACH2Q96NX9 599 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 MCMBPQ9BTE3 642 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 TMEM134Q9H6X4 195 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 CAB39LQ9H9S4 337 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 PCDH12Q9NPG4 1184 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMAD1-215ENST00000515385 ANAPC2Q9UJX6 822 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 FEM1BQ9UK73 627 aa12.87□□□□□ -0.35
SMAD1-215ENST00000515385 RUVBL2Q9Y230 463 aaKnown RBP12.87□□□□□ -0.35
SMAD1-215ENST00000515385 TMA7Q9Y2S6 64 aaKnown RBP12.87□□□□□ -0.35
SMAD1-215ENST00000515385 UNCXA6NJT0 531 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 SYCE1LA8MT33 242 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 A8MU76 341 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 TAF4O00268 1085 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 NME4O00746 187 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 HOXC11O43248 304 aaPredicted RBP12.86□□□□□ -0.35
SMAD1-215ENST00000515385 NDUFS2O75306 463 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 UPK1BO75841 260 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 MICAL2O94851 1124 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 HPRP00739 348 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 KRT19P08727 400 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 CDH1P12830 882 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 GJA9P57773 515 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 GBE1Q04446 702 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 VAC14Q08AM6 782 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 TCP10Q12799 353 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 CRY2Q49AN0 593 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 KIAA1841Q6NSI8 718 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 LAYNQ6UX15 382 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 TMC5Q6UXY8 1006 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 FKBP9P1Q75LS8 142 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 SH3BP5LQ7L8J4 393 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 R3HCC1LQ7Z5L2 792 aaKnown RBP12.86□□□□□ -0.35
SMAD1-215ENST00000515385 CLIP4Q8N3C7 705 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 ASCC1Q8N9N2 400 aaKnown RBP12.86□□□□□ -0.35
SMAD1-215ENST00000515385 SIMC1Q8NDZ2 872 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 FAM110BQ8TC76 370 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 TP53INP1Q96A56 240 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 ZNF669Q96BR6 464 aaPredicted RBP12.86□□□□□ -0.35
SMAD1-215ENST00000515385 MFSD3Q96ES6 412 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 AURKBQ96GD4 344 aaPredicted RBP12.86□□□□□ -0.35
SMAD1-215ENST00000515385 ATXN7L3BQ96GX2 97 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 ELMO2Q96JJ3 720 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 FCRL3Q96P31 734 aaPredicted RBP12.86□□□□□ -0.35
SMAD1-215ENST00000515385 CLSTN3Q9BQT9 956 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 CCDC177Q9NQR7 707 aaPredicted RBP12.86□□□□□ -0.35
SMAD1-215ENST00000515385 GPATCH2LQ9NWQ4 482 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 GGA3Q9NZ52 723 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 BFARQ9NZS9 450 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 GABBR1Q9UBS5 961 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 FAM198AQ9UFP1 575 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 GTF2IRD1Q9UHL9 959 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 AP4E1Q9UPM8 1137 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 PDE10AQ9Y233 779 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 NAALAD2Q9Y3Q0 740 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 TLL2Q9Y6L7 1015 aa12.86□□□□□ -0.35
SMAD1-215ENST00000515385 ZNF99A8MXY4 864 aaPredicted RBP12.85□□□□□ -0.35
SMAD1-215ENST00000515385 ARPC2O15144 300 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 TPST1O60507 370 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 MAP3K6O95382 1288 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 ICAM1P05362 532 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 GPD2P43304 727 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 ALDH7A1P49419 539 aaKnown RBP12.85□□□□□ -0.35
SMAD1-215ENST00000515385 ALDH3A2P51648 485 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 ACTR2P61160 394 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 COPZ1P61923 177 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 RPS6P62753 249 aaKnown RBP12.85□□□□□ -0.35
SMAD1-215ENST00000515385 PTPN11Q06124 597 aaPredicted RBP12.85□□□□□ -0.35
SMAD1-215ENST00000515385 PRPSAP1Q14558 356 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 ACOX1Q15067 660 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 DPYSL2Q16555 572 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 CYP51A1Q16850 503 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 COQ5Q5HYK3 327 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 FAM182AQ5T1J6 154 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 SCARA5Q6ZMJ2 495 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 RNF19BQ6ZMZ0 732 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 CATSPER4Q7RTX7 472 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 FSTL5Q8N475 847 aaPredicted RBP12.85□□□□□ -0.35
SMAD1-215ENST00000515385 SVOPQ8N4V2 548 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 CCNYL1Q8N7R7 359 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 CCDC126Q96EE4 140 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 TARS2Q9BW92 718 aaKnown RBP12.85□□□□□ -0.35
SMAD1-215ENST00000515385 EMILIN2Q9BXX0 1053 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms