RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 NR5A2O00482 541 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 FFAR2O15552 330 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 ZNF8P17098 575 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-211ENST00000514893 ABCB4P21439 1286 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 EEF1A1P68104 462 aaKnown RBP3.6□□□□□ -1.83
NEDD4-211ENST00000514893 BTKQ06187 659 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 PDCLQ13371 301 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 SOWAHAQ2M3V2 549 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 PAPPA-AS1Q5QFB9 102 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 EEF1A1P5Q5VTE0 462 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 SFMBT2Q5VUG0 894 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 FAAP20Q6NZ36 180 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 LURAP1LQ8IV03 231 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 RNF113BQ8IZP6 322 aaKnown RBP3.6□□□□□ -1.83
NEDD4-211ENST00000514893 BBS10Q8TAM1 723 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 HSPH1Q92598 858 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 LRR1Q96L50 414 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 TRIM15Q9C019 465 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 PLEKHA2Q9HB19 425 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 OBP2BQ9NPH6 170 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 HCFC1R1Q9NWW0 138 aa3.6□□□□□ -1.83
NEDD4-211ENST00000514893 FAM90A20PA6NIJ5 464 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 SMIM1B2RUZ4 78 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 ADAP00813 363 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 RXRAP19793 462 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 SEC61BP60468 96 aaKnown RBP3.59□□□□□ -1.83
NEDD4-211ENST00000514893 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 B3GNT6Q6ZMB0 384 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 PRSS45Q7RTY3 260 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 P2RY8Q86VZ1 359 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 WDR63Q8IWG1 891 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 SLC20A1Q8WUM9 679 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 PPM1EQ8WY54 764 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 ABTB1Q969K4 478 aaPredicted RBP3.59□□□□□ -1.83
NEDD4-211ENST00000514893 ZDHHC18Q9NUE0 388 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 PADI1Q9ULC6 663 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 NFE2L3Q9Y4A8 694 aa3.59□□□□□ -1.83
NEDD4-211ENST00000514893 GOLGA6L9A6NEM1 432 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 PSMD14O00487 310 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 SRD5A1P18405 259 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 CHATP28329 748 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 MMP14P50281 582 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 TBL3Q12788 808 aaKnown RBP3.58□□□□□ -1.84
NEDD4-211ENST00000514893 GAGE5Q13069 117 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 GAGE6Q13070 117 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 ITGADQ13349 1161 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 ESCO2Q56NI9 601 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 IL20RBQ6UXL0 311 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 ATF7IPQ6VMQ6 1270 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 PARP16Q8N5Y8 322 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 ERGIC1Q969X5 290 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 TTC12Q9H892 705 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-211ENST00000514893 PAK5Q9P286 719 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 AMDHD2Q9Y303 409 aa3.58□□□□□ -1.84
NEDD4-211ENST00000514893 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 LGALS16A8MUM7 142 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 PCNAP12004 261 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 RYKP34925 604 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 KRT9P35527 623 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 MCM2P49736 904 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 RBM5P52756 815 aaKnown RBP eCLIP3.57□□□□□ -1.84
NEDD4-211ENST00000514893 KRTAP10-8P60410 259 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 GNB1P62873 340 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 NOTCH2Q04721 2471 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 RUNX2Q13950 521 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 ZNF239Q16600 458 aaKnown RBP3.57□□□□□ -1.84
NEDD4-211ENST00000514893 CTF1Q16619 201 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 KRT24Q2M2I5 525 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 FBXO43Q4G163 708 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 GGT6Q6P531 493 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 RRAGAQ7L523 313 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 NOTCH2NLQ7Z3S9 236 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 WDR20Q8TBZ3 569 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 PARD3BQ8TEW8 1205 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 GDPD5Q8WTR4 605 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 TMEM190Q8WZ59 177 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 ST6GAL2Q96JF0 529 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 PDZD7Q9H5P4 517 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 RPS10P5Q9NQ39 176 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 HDAC6Q9UBN7 1215 aa3.57□□□□□ -1.84
NEDD4-211ENST00000514893 A0A0J9YWU9 116 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 E7EVH7 732 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 ARHGEF9O43307 516 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 S1PR1P21453 382 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 CLK1P49759 484 aaKnown RBP3.56□□□□□ -1.84
NEDD4-211ENST00000514893 CLCNKAP51800 687 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 PNLIPRP1P54315 467 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 PFKFB4Q16877 469 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 SH2D4BQ5SQS7 431 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 PGBD2Q6P3X8 592 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 SYT13Q7L8C5 426 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 CHERPQ8IWX8 916 aaKnown RBP3.56□□□□□ -1.84
NEDD4-211ENST00000514893 FAM177A1Q8N128 213 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-211ENST00000514893 ZNF527Q8NB42 609 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 CSGALNACT1Q8TDX6 532 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 TM9SF4Q92544 642 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 RND1Q92730 232 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 SNAPC3Q92966 411 aa3.56□□□□□ -1.84
NEDD4-211ENST00000514893 ZNF689Q96CS4 500 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms