RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 ZDHHC24Q6UX98 284 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 CAND1Q86VP6 1230 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 ZCCHC9Q8N567 271 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 TMEM105Q8N8V8 129 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 UBXN4Q92575 508 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 PEX13Q92968 403 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 SERPINB12Q96P63 405 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 RANBP9Q96S59 729 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 TRIM31Q9BZY9 425 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 TSPYL1Q9H0U9 437 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 ANKZF1Q9H8Y5 726 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 EPB41L5Q9HCM4 733 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 DYRK4Q9NR20 520 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 ZDHHC18Q9NUE0 388 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 RIMKLBQ9ULI2 386 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 PLXNA2O75051 1894 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 WDFY4Q6ZS81 3184 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 FAM186AA6NE01 2351 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 E7ESA3 106 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 F5H423 210 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 EIF3HO15372 352 aaKnown RBP eCLIP12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 PSMA3P25788 255 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 MMP12P39900 470 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 TPMTP51580 245 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 METAP1P53582 386 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 CNTN1Q12860 1018 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 LAMB3Q13751 1172 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 WDR93Q6P2C0 686 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 NEK5Q6P3R8 708 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 USP45Q70EL2 814 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 DPPA4Q7L190 304 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 CBARPQ8N350 705 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 TAB3Q8N5C8 712 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 GPR161Q8N6U8 529 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 LPCAT1Q8NF37 534 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 MDGA1Q8NFP4 955 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 BRSK1Q8TDC3 778 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 PDCD6IPQ8WUM4 868 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 PTCD2Q8WV60 388 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 RMDN1Q96DB5 314 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 LRRC39Q96DD0 335 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 PHOX2BQ99453 314 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 IL22Q9GZX6 179 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 DPH5Q9H2P9 285 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 FBXL12Q9NXK8 326 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 FBXO4Q9UKT5 387 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 NCKAP1Q9Y2A7 1128 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 CEP192Q8TEP8 1941 aa12.03□□□□□ -0.48
PDLIM5-220ENST00000514830 PSMD11O00231 422 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 SPINT1O43278 529 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 GALR2O43603 387 aaPredicted RBP12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 TSPAN6O43657 245 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 PLRG1O43660 514 aaKnown RBP12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 USP12O75317 370 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 RHOXF2BP0C7M4 288 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 ACADMP11310 421 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 CYP2A6P11509 494 aaPredicted RBP12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 ZNF30P17039 623 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 MCM3P25205 808 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 ECHS1P30084 290 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 OXTRP30559 389 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 GRIA1P42261 906 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 ABL2P42684 1182 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 CHRNA4P43681 627 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 EPHB1P54762 984 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 TAS2R38P59533 333 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 PDE1BQ01064 536 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 CREB5Q02930 508 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 GALNT3Q14435 633 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 SPARCL1Q14515 664 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 AGERQ15109 404 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 TRADDQ15628 312 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 CDKN3Q16667 212 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 TMEM52BQ4KMG9 183 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 ERAP2Q6P179 960 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 FBXL19Q6PCT2 694 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 CEP128Q6ZU80 1094 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 TTC7BQ86TV6 843 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 RELL1Q8IUW5 271 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 C1orf210Q8IVY1 113 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 PDIK1LQ8N165 341 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 HDDC3Q8N4P3 179 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 DTWD2Q8NBA8 298 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 OR52K1Q8NGK4 314 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 FBXO25Q8TCJ0 367 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 HMGB4Q8WW32 186 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 NELL1Q92832 810 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 HHIPQ96QV1 700 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 OMDQ99983 421 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 RHOXF2Q9BQY4 288 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 FAM126AQ9BYI3 521 aaPredicted RBP12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 PCED1AQ9H1Q7 454 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 SGK2Q9HBY8 427 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 MRM3Q9HC36 420 aaKnown RBP12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 PREBQ9HCU5 417 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 PCDH12Q9NPG4 1184 aa12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 POLR3BQ9NW08 1133 aaPredicted RBP12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 SPATA6Q9NWH7 488 aaPredicted RBP12.02□□□□□ -0.49
PDLIM5-220ENST00000514830 BFARQ9NZS9 450 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms