RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 GPR78Q96P69 363 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 SIKE1Q9BRV8 207 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 ADGRE3Q9BY15 652 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 ECT2Q9H8V3 914 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 MAN1C1Q9NR34 630 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 PCDHGC4Q9Y5F7 938 aa15.01□□□□□ -0.01
VCAN-211ENST00000513984 CCDC162PA2VCL2 907 aa15□□□□□ -0.01
VCAN-211ENST00000513984 OR51F1A6NGY5 319 aa15□□□□□ -0.01
VCAN-211ENST00000513984 TARM1B6A8C7 271 aa15□□□□□ -0.01
VCAN-211ENST00000513984 ITM2AO43736 263 aa15□□□□□ -0.01
VCAN-211ENST00000513984 H2AFYO75367 372 aaKnown RBP15□□□□□ -0.01
VCAN-211ENST00000513984 GLP2RO95838 553 aa15□□□□□ -0.01
VCAN-211ENST00000513984 SBK3P0C264 359 aa15□□□□□ -0.01
VCAN-211ENST00000513984 OGNP20774 298 aaKnown RBP15□□□□□ -0.01
VCAN-211ENST00000513984 SLC12A2P55011 1212 aa15□□□□□ -0.01
VCAN-211ENST00000513984 ITGA9Q13797 1035 aa15□□□□□ -0.01
VCAN-211ENST00000513984 ZNF460Q14592 562 aa15□□□□□ -0.01
VCAN-211ENST00000513984 GPR158Q5T848 1215 aa15□□□□□ -0.01
VCAN-211ENST00000513984 LRRC8EQ6NSJ5 796 aa15□□□□□ -0.01
VCAN-211ENST00000513984 MRNIPQ6NTE8 343 aa15□□□□□ -0.01
VCAN-211ENST00000513984 RETSATQ6NUM9 610 aa15□□□□□ -0.01
VCAN-211ENST00000513984 ZYG11AQ6WRX3 759 aa15□□□□□ -0.01
VCAN-211ENST00000513984 GLT6D1Q7Z4J2 308 aa15□□□□□ -0.01
VCAN-211ENST00000513984 APCDD1Q8J025 514 aa15□□□□□ -0.01
VCAN-211ENST00000513984 TTC16Q8NEE8 873 aa15□□□□□ -0.01
VCAN-211ENST00000513984 LPCAT1Q8NF37 534 aa15□□□□□ -0.01
VCAN-211ENST00000513984 FIBINQ8TAL6 211 aa15□□□□□ -0.01
VCAN-211ENST00000513984 SREK1Q8WXA9 508 aaKnown RBP15□□□□□ -0.01
VCAN-211ENST00000513984 BHMTQ93088 406 aa15□□□□□ -0.01
VCAN-211ENST00000513984 TSPAN17Q96FV3 270 aa15□□□□□ -0.01
VCAN-211ENST00000513984 SORT1Q99523 831 aa15□□□□□ -0.01
VCAN-211ENST00000513984 OLFM1Q99784 485 aa15□□□□□ -0.01
VCAN-211ENST00000513984 C17orf80Q9BSJ5 609 aa15□□□□□ -0.01
VCAN-211ENST00000513984 HEY2Q9UBP5 337 aa15□□□□□ -0.01
VCAN-211ENST00000513984 ZFP69BQ9UJL9 534 aa15□□□□□ -0.01
VCAN-211ENST00000513984 CORO1CQ9ULV4 474 aaPredicted RBP15□□□□□ -0.01
VCAN-211ENST00000513984 FCF1Q9Y324 198 aaKnown RBP15□□□□□ -0.01
VCAN-211ENST00000513984 NUMBLQ9Y6R0 609 aa15□□□□□ -0.01
VCAN-211ENST00000513984 CXorf51AA0A1B0GTR3 108 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 ANKRD66B4E2M5 251 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 H0YHG0 523 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 TK2O00142 265 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 CD3EAPO15446 510 aaKnown RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 BUD23O43709 281 aaKnown RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 TRIM13O60858 407 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 MOSPD3O75425 235 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 LYPLA1O75608 230 aaPredicted RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 RFPL2O75678 378 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 UNC5CO95185 931 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 CSPG5O95196 566 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 PTPN2P17706 415 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 ABCE1P61221 599 aaKnown RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 AP1S1P61966 158 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 LMAN2Q12907 356 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 DLG1Q12959 904 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 PTPRCAPQ14761 206 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 HSF5Q4G112 596 aaPredicted RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 CLNKQ7Z7G1 428 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 MTDHQ86UE4 582 aaKnown RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 CMTM8Q8IZV2 173 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 FSTL5Q8N475 847 aaPredicted RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 MDGA1Q8NFP4 955 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 PIWIL2Q8TC59 973 aaKnown RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 SH3RF2Q8TEC5 729 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 SCG3Q8WXD2 468 aaKnown RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 TCEAL4Q96EI5 215 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 CDKN2AIPNLQ96HQ2 116 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 MTIF3Q9H2K0 278 aaKnown RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 RASSF4Q9H2L5 321 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 SUDS3Q9H7L9 328 aaPredicted RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 TXLNGQ9NUQ3 528 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 OXSMQ9NWU1 459 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 KIAA1522Q9P206 1035 aaPredicted RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 RUVBL2Q9Y230 463 aaKnown RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 CFAP73A6NFT4 308 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 SOBPA7XYQ1 873 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 TMEM114B3SHH9 223 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 FZD6O60353 706 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 ATP5HO75947 161 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 WISP3O95389 354 aaPredicted RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 MT-CO1P00395 513 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 HOXB8P17481 243 aaPredicted RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 ARRB2P32121 409 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 KPNA2P52292 529 aaKnown RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 PLK1P53350 603 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 PRKAA2P54646 552 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 CAMK1Q14012 370 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 TYSND1Q2T9J0 566 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 HECTD2Q5U5R9 776 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 TPGS1Q6ZTW0 290 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 METTL3Q86U44 580 aaKnown RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 LEMD2Q8NC56 503 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 OR4L1Q8NH43 312 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 PPP4R1Q8TF05 950 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 NXNL1Q96CM4 212 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 NDNQ99608 321 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 WWP1Q9H0M0 922 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 SMG9Q9H0W8 520 aaKnown RBP14.99□□□□□ -0.01
VCAN-211ENST00000513984 CATSPERZQ9NTU4 200 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms