RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 DEFB133Q30KQ1 61 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 PROX2Q3B8N5 592 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 PELI3Q8N2H9 469 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 BBS5Q8N3I7 341 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 TEX26Q8N6G2 289 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 CCNYQ8ND76 341 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 OR4C6Q8NH72 309 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 LMX1AQ8TE12 382 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 MRFAP1L1Q96HT8 127 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 LGMNQ99538 433 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 DTLQ9NZJ0 730 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 LCMT1Q9UIC8 334 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 INTUQ9ULD6 942 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 FREM2Q5SZK8 3169 aa13.35□□□□□ -0.27
RNF4-215ENST00000511843 IGF2RP11717 2491 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 RP1P56715 2156 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 COL27A1Q8IZC6 1860 aaPredicted RBP13.34□□□□□ -0.27
RNF4-215ENST00000511843 ASPMQ8IZT6 3477 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 ASXL3Q9C0F0 2248 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 DMXL2Q8TDJ6 3036 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 NPIPB15A6NHN6 443 aaPredicted RBP13.34□□□□□ -0.27
RNF4-215ENST00000511843 K7ESM1 405 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 KCNK1O00180 336 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 MATN3O15232 486 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 SPOPO43791 374 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 SOCS5O75159 536 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 GCATO75600 419 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 HLA-DQB2P05538 268 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 CELA2BP08218 269 aaPredicted RBP13.34□□□□□ -0.27
RNF4-215ENST00000511843 ALPIP09923 528 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 CCNB1P14635 433 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 CKMT2P17540 419 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 LHCGRP22888 699 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 MARCKSL1P49006 195 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 HNRNPKP61978 463 aaKnown RBP eCLIP13.34□□□□□ -0.27
RNF4-215ENST00000511843 POLR2LP62875 67 aaKnown RBP13.34□□□□□ -0.27
RNF4-215ENST00000511843 DAB2P98082 770 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 NIPAL4Q0D2K0 466 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 ZNF211Q13398 564 aaPredicted RBP13.34□□□□□ -0.27
RNF4-215ENST00000511843 ACOX1Q15067 660 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 CNGA3Q16281 694 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 IFI16Q16666 785 aaKnown RBP13.34□□□□□ -0.27
RNF4-215ENST00000511843 FAXCQ5TGI0 409 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 MFSD7Q6UXD7 560 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 CCNI2Q6ZMN8 369 aaPredicted RBP13.34□□□□□ -0.27
RNF4-215ENST00000511843 MACC1Q6ZN28 852 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 TMPRSS7Q7RTY8 843 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 RD3Q7Z3Z2 195 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 TSPAN33Q86UF1 283 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 RFX6Q8HWS3 928 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 PHACTR4Q8IZ21 702 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 MAML1Q92585 1016 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 TSACCQ96A04 125 aaPredicted RBP13.34□□□□□ -0.27
RNF4-215ENST00000511843 FUBP1Q96AE4 644 aaKnown RBP13.34□□□□□ -0.27
RNF4-215ENST00000511843 IFT43Q96FT9 208 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 CEP41Q9BYV8 373 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 RBM22Q9NW64 420 aaKnown RBP eCLIP13.34□□□□□ -0.271e-9■■■■■ 27.3
RNF4-215ENST00000511843 APOBEC3BQ9UH17 382 aaKnown RBP13.34□□□□□ -0.27
RNF4-215ENST00000511843 SALL4Q9UJQ4 1053 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 PCDHA13Q9Y5I0 950 aa13.34□□□□□ -0.27
RNF4-215ENST00000511843 ZFC3H1O60293 1989 aaKnown RBP13.33□□□□□ -0.28
RNF4-215ENST00000511843 LY6G6EA0A0G2JKS1 128 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 FAM221BA6H8Z2 402 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 RCCD1A6NED2 376 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 APOL1O14791 398 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 AQP9O43315 295 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 KRT37O76014 449 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 PGLSO95336 258 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 LCA5LO95447 670 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 CCNCP24863 283 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 ZBTB17Q13105 803 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 PTK2BQ14289 1009 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 TCEAL1Q15170 157 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 PRRT3Q5FWE3 981 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 ARMC12Q5T9G4 340 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 SLC9A4Q6AI14 798 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 TIGD7Q6NT04 549 aaPredicted RBP13.33□□□□□ -0.28
RNF4-215ENST00000511843 RFLNAQ6ZTI6 216 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 HSD11B1LQ7Z5J1 315 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 LRRC49Q8IUZ0 686 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 HID1Q8IV36 788 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 RHOT1Q8IXI2 618 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 CCDC13Q8IYE1 715 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.33□□□□□ -0.28
RNF4-215ENST00000511843 ZCCHC14Q8WYQ9 949 aaKnown RBP13.33□□□□□ -0.28
RNF4-215ENST00000511843 HDAC11Q96DB2 347 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 APOLD1Q96LR9 279 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 COQ10AQ96MF6 247 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 TSGA13Q96PP4 275 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 APOOQ9BUR5 198 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 LRRC61Q9BV99 259 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 POLR1EQ9GZS1 481 aaKnown RBP13.33□□□□□ -0.28
RNF4-215ENST00000511843 NLGN3Q9NZ94 848 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 SAE1Q9UBE0 346 aaPredicted RBP13.33□□□□□ -0.28
RNF4-215ENST00000511843 ZMIZ1Q9ULJ6 1067 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 REXO2Q9Y3B8 237 aaKnown RBP13.33□□□□□ -0.28
RNF4-215ENST00000511843 RAI2Q9Y5P3 530 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 ALG6Q9Y672 507 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 U3KQA8 63 aa13.33□□□□□ -0.28
RNF4-215ENST00000511843 EPG5Q9HCE0 2579 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms