RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 KRT9P35527 623 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 LIG3P49916 1009 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 MTM1Q13496 603 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 STIM1Q13586 685 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 AGERQ15109 404 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 ACBD5Q5T8D3 534 aaPredicted RBP19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 ZNF438Q7Z4V0 828 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 NRROSQ86YC3 692 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 OR56A4Q8NGH8 313 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 HMCESQ96FZ2 354 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 ABHD17AQ96GS6 310 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 EXOC2Q96KP1 924 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 MAGEH1Q9H213 219 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 TMEM9Q9P0T7 183 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 LHX3Q9UBR4 397 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 APEX2Q9UBZ4 518 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 OR12D3Q9UGF7 316 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 MFHAS1Q9Y4C4 1052 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 ABCA12Q86UK0 2595 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 TSPAN11A1L157 253 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 GOLGA8SH3BPF8 625 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 K7EM74 188 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 HGSO14964 777 aaPredicted RBP19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 BUB1O43683 1085 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 KDELR3O43731 214 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 PRKAR1AP10644 381 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 RHOQP17081 205 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 NR1D1P20393 614 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 MPSTP25325 297 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 OAS2P29728 719 aaKnown RBP19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 ALDH4A1P30038 563 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 CSF2RBP32927 897 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 CDH5P33151 784 aaPredicted RBP19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 SCNN1AP37088 669 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 MMP12P39900 470 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 CD97P48960 835 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 MAPKAPK2P49137 400 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 GEMIN4P57678 1058 aaKnown RBP19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 KIAA1024LP59773 190 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 NRG1Q02297 640 aaPredicted RBP19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 PTK2Q05397 1052 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 NKAIN2Q5VXU1 208 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 RWDD4Q6NW29 188 aaKnown RBP19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 EMC1Q8N766 993 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 PATE1Q8WXA2 126 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 C18orf8Q96DM3 657 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 CCDC34Q96HJ3 373 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 OCIAD1Q9NX40 245 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 ST14Q9Y5Y6 855 aa19.12■□□□□ 0.65
HMGCS1-206ENST00000511774 ZNF891A8MT65 544 aaPredicted RBP19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 BUB1BO60566 1050 aaPredicted RBP19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 RAD1O60671 282 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 LRIG2O94898 1065 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 IGSF6O95976 241 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 FUCA1P04066 466 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 FGF1P05230 155 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 PON1P27169 355 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 ETFBP38117 255 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 RHOAP61586 193 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 ATP11AP98196 1134 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 ELP6Q0PNE2 266 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 NR1D2Q14995 579 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 UGP2Q16851 508 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 ATP1A1-AS1Q5TC04 95 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 GPBAR1Q8TDU6 330 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 PTCD2Q8WV60 388 aaKnown RBP19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 SLC45A3Q96JT2 553 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 SPRY4Q9C004 299 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 LRRC4CQ9HCJ2 640 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 CYP4F12Q9HCS2 524 aa19.11■□□□□ 0.65
HMGCS1-206ENST00000511774 LOC101059948A0A1B0GTJ6 334 aa19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 RAMP2O60895 175 aa19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 ADRA1BP35368 520 aa19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 UQCRFS1P47985 274 aa19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 LIMK2P53671 638 aa19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 MLLT10P55197 1068 aa19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 SNX16P57768 344 aa19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 RALGDSQ12967 914 aa19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 CYTH1Q15438 398 aa19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 C15orf59Q2T9L4 293 aaPredicted RBP19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 UNC5BQ8IZJ1 945 aa19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 AKAP7Q9P0M2 348 aaPredicted RBP19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 PLEKHB1Q9UF11 243 aaPredicted RBP19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 PILRAQ9UKJ1 303 aa19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 HPCAL4Q9UM19 191 aa19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 HIVEP3Q5T1R4 2406 aa19.1■□□□□ 0.65
HMGCS1-206ENST00000511774 GNA14O95837 355 aa19.09■□□□□ 0.65
HMGCS1-206ENST00000511774 RNF224P0DH78 156 aa19.09■□□□□ 0.65
HMGCS1-206ENST00000511774 RAD51Q06609 339 aa19.09■□□□□ 0.65
HMGCS1-206ENST00000511774 CDC20Q12834 499 aa19.09■□□□□ 0.65
HMGCS1-206ENST00000511774 ANKS6Q68DC2 871 aa19.09■□□□□ 0.65
HMGCS1-206ENST00000511774 DPY19L2P1Q6NXN4 242 aa19.09■□□□□ 0.65
HMGCS1-206ENST00000511774 TIPARPQ7Z3E1 657 aaKnown RBP19.09■□□□□ 0.65
HMGCS1-206ENST00000511774 CCDC185Q8N715 623 aa19.09■□□□□ 0.65
HMGCS1-206ENST00000511774 BMPERQ8N8U9 685 aa19.09■□□□□ 0.65
HMGCS1-206ENST00000511774 ATL2Q8NHH9 583 aa19.09■□□□□ 0.65
HMGCS1-206ENST00000511774 CATSPER2Q96P56 530 aa19.09■□□□□ 0.65
HMGCS1-206ENST00000511774 DDA1Q9BW61 102 aa19.09■□□□□ 0.65
HMGCS1-206ENST00000511774 TP53TG5Q9Y2B4 290 aa19.09■□□□□ 0.65
HMGCS1-206ENST00000511774 CSMD1Q96PZ7 3565 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms