RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	SHROOM3	Q8TF72	1996 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	ZNF487	B1APH4	448 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081		H3BM21	787 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	AQP9	O43315	295 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	MFAP3L	O75121	409 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	GP1BA	P07359	652 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	KRT7	P08729	469 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	ALPPL2	P10696	532 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	JUP	P14923	745 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	THOP1	P52888	689 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	GALNT2	Q10471	571 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	IRF4	Q15306	451 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	TSR1	Q2NL82	804 aa	Known RBP	12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	ANKRD20A8P	Q5CZ79	823 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	MARC1	Q5VT66	337 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	NCBP2-AS2	Q69YL0	99 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	ALG1L	Q6GMV1	187 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	SARM1	Q6SZW1	724 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	MACC1	Q6ZN28	852 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	DPPA4	Q7L190	304 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	DCBLD1	Q8N8Z6	715 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	SLC35G2	Q8TBE7	412 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	MAML1	Q92585	1016 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	APOO	Q9BUR5	198 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	NOD2	Q9HC29	1040 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	AMACR	Q9UHK6	382 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	COQ6	Q9Y2Z9	468 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	PCDHGC4	Q9Y5F7	938 aa		12.2	□□□□□ -0.46
CLDND1-223	ENST00000511081	TTC24	A2A3L6	582 aa	Predicted RBP	12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	FAM149A	A5PLN7	773 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	LMO7DN	F2Z398	122 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	MATN3	O15232	486 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	AKR1B10	O60218	316 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	LZTS3	O60299	673 aa	Predicted RBP	12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	FZD6	O60353	706 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	GCAT	O75600	419 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	NEBL	O76041	1014 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	RECQL5	O94762	991 aa	Predicted RBP	12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	CES1	P23141	567 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	KDELR1	P24390	212 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	CCNC	P24863	283 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	GARS	P41250	739 aa	Known RBP	12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	ARHGAP25	P42331	645 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	DUSP3	P51452	185 aa	Predicted RBP	12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	ADK	P55263	362 aa	Known RBP	12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	INSM1	Q01101	510 aa	Predicted RBP	12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	TARDBP	Q13148	414 aa	Known RBP eCLIP	12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	MTM1	Q13496	603 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	KRT81	Q14533	505 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	ZNF235	Q14590	738 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	IHH	Q14623	411 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	INPP5A	Q14642	412 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	RTP5	Q14D33	572 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	HS1BP3	Q53T59	392 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	CCDC157	Q569K6	752 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	CFAP58	Q5T655	872 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	CDCP2	Q5VXM1	449 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	ZCCHC8	Q6NZY4	707 aa	Known RBP	12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	VSIG1	Q86XK7	387 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	MAP7D3	Q8IWC1	876 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	SDR16C5	Q8N3Y7	309 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	ATPAF2	Q8N5M1	289 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	PQLC3	Q8N755	202 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	KCTD6	Q8NC69	237 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	RNF214	Q8ND24	703 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	MDM1	Q8TC05	714 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	SCRN2	Q96FV2	425 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	CCDC42	Q96M95	316 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	COQ10A	Q96MF6	247 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	MCCC1	Q96RQ3	725 aa	Predicted RBP	12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	BOC	Q9BWV1	1114 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	CLPB	Q9H078	707 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	TCEAL2	Q9H3H9	227 aa	Predicted RBP	12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	KCTD5	Q9NXV2	234 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	NCKIPSD	Q9NZQ3	722 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	SPAST	Q9UBP0	616 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	INTU	Q9ULD6	942 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	PHTF1	Q9UMS5	762 aa		12.19	□□□□□ -0.46
CLDND1-223	ENST00000511081	RP1	P56715	2156 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	EME2	A4GXA9	379 aa	Predicted RBP	12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	FFAR2	O15552	330 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	OPA1	O60313	960 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	PRKCG	P05129	697 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	TPM1	P09493	284 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	HNF1B	P35680	557 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	MMP13	P45452	471 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	BLK	P51451	505 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	HK3	P52790	923 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	SEMG2	Q02383	582 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	PPARD	Q03181	441 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	CYP4F3	Q08477	520 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	SLC10A2	Q12908	348 aa	Predicted RBP	12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	TRAF2	Q12933	501 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	NFATC4	Q14934	902 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	IFI16	Q16666	785 aa	Known RBP	12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	HES3	Q5TGS1	186 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	LRRC38	Q5VT99	294 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	LVRN	Q6Q4G3	990 aa		12.18	□□□□□ -0.46
CLDND1-223	ENST00000511081	CNGA4	Q8IV77	575 aa		12.18	□□□□□ -0.46

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