RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 SLC8A3P57103 927 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 HMGN5P82970 282 aaKnown RBP9.65□□□□□ -0.86
PTPN20-223ENST00000509900 CDK18Q07002 472 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 NFATC4Q14934 902 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 IRF4Q15306 451 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 GOLGA7BQ2TAP0 167 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 MIIPQ5JXC2 388 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 C22orf39Q6P5X5 142 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 FOXR2Q6PJQ5 311 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 ZNF517Q6ZMY9 492 aaPredicted RBP9.65□□□□□ -0.86
PTPN20-223ENST00000509900 C17orf82Q86X59 251 aaPredicted RBP9.65□□□□□ -0.86
PTPN20-223ENST00000509900 SIX6OS1Q8N1H7 587 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 CISD2Q8N5K1 135 aaKnown RBP9.65□□□□□ -0.86
PTPN20-223ENST00000509900 FAM184AQ8NB25 1140 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 GALNT6Q8NCL4 622 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 CCL4L1Q8NHW4 92 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 ZNF507Q8TCN5 953 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 DQX1Q8TE96 717 aaKnown RBP9.65□□□□□ -0.86
PTPN20-223ENST00000509900 ZPBPQ9BS86 351 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 DPEP2Q9H4A9 486 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 FBXO8Q9NRD0 319 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 COPG2Q9UBF2 871 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 KLQ9UEF7 1012 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 ZNF451Q9Y4E5 1061 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 DGKBQ9Y6T7 804 aa9.65□□□□□ -0.86
PTPN20-223ENST00000509900 A0A1B0GTH6 734 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 RHPN2P1A8MT19 583 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 F5H5T6 163 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 NEMP1O14524 444 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 EXOC3O60645 756 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 ENDOD1O94919 500 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 TNFP01375 233 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 LTFP02788 710 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 THBS1P07996 1170 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 LCP1P13796 627 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 CD99P14209 185 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 ZNF28P17035 718 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 BPIP17213 487 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 CCL11P51671 97 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 NUCB2P80303 420 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 SQSTM1Q13501 440 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 ART3Q13508 389 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 CHRNA6Q15825 494 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 PLEKHN1Q494U1 663 aaPredicted RBP9.64□□□□□ -0.87
PTPN20-223ENST00000509900 ZC3H12AQ5D1E8 599 aaKnown RBP9.64□□□□□ -0.87
PTPN20-223ENST00000509900 MCTP1Q6DN14 999 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 TMEM214Q6NUQ4 689 aaKnown RBP9.64□□□□□ -0.87
PTPN20-223ENST00000509900 NELFCDQ8IXH7 590 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 C12orf56Q8IXR9 622 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 FAM186BQ8IYM0 893 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 GLIS1Q8NBF1 620 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 CLEC4CQ8WTT0 213 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 OR1E3Q8WZA6 343 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 SERPINB11Q96P15 392 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 PPP1R9BQ96SB3 815 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 BARD1Q99728 777 aaKnown RBP9.64□□□□□ -0.87
PTPN20-223ENST00000509900 NIF3L1Q9GZT8 377 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 TMEM168Q9H0V1 697 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 PDP2Q9P2J9 529 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 VPS51Q9UID3 782 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 TSPAN16Q9UKR8 245 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 ABCA4P78363 2273 aa9.64□□□□□ -0.87
PTPN20-223ENST00000509900 FLNAP21333 2647 aaKnown RBP9.64□□□□□ -0.87
PTPN20-223ENST00000509900 IGHV1OR21-1A0A087WYE8 117 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 TMEM110-MUSTN1A8MSY1 372 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 PIK3R2O00459 728 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 AREL1O15033 823 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 MMP20O60882 483 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 RECKO95980 971 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 HNRNPH3P31942 346 aaKnown RBP9.63□□□□□ -0.87
PTPN20-223ENST00000509900 MAN1A1P33908 653 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 GPR3P46089 330 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 SNRPFP62306 86 aaKnown RBP9.63□□□□□ -0.87
PTPN20-223ENST00000509900 SNRPNP63162 240 aaKnown RBP9.63□□□□□ -0.87
PTPN20-223ENST00000509900 IRX6P78412 446 aaPredicted RBP9.63□□□□□ -0.87
PTPN20-223ENST00000509900 BST2Q10589 180 aaKnown RBP9.63□□□□□ -0.87
PTPN20-223ENST00000509900 KLHL40Q2TBA0 621 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 C1orf220Q5T0J3 134 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 TTC39BQ5VTQ0 682 aaPredicted RBP9.63□□□□□ -0.87
PTPN20-223ENST00000509900 RRAGBQ5VZM2 374 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 TMEM71Q6P5X7 295 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 TAC4Q86UU9 113 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 IRF2BP1Q8IU81 584 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 CCDC65Q8IXS2 484 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 IQCKQ8N0W5 287 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 UBA3Q8TBC4 463 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 RAB7BQ96AH8 199 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 BTN2A3PQ96KV6 586 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 ZSCAN16Q9H4T2 348 aaPredicted RBP9.63□□□□□ -0.87
PTPN20-223ENST00000509900 SPATS2LQ9NUQ6 558 aaKnown RBP9.63□□□□□ -0.87
PTPN20-223ENST00000509900 NTNG1Q9Y2I2 539 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 OR1A2Q9Y585 309 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 PCDHGB7Q9Y5F8 929 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 PCDHGA6Q9Y5G7 932 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 KLF2Q9Y5W3 355 aaPredicted RBP9.63□□□□□ -0.87
PTPN20-223ENST00000509900 ATRQ13535 2644 aa9.63□□□□□ -0.87
PTPN20-223ENST00000509900 CNTRLQ7Z7A1 2325 aa9.62□□□□□ -0.87
PTPN20-223ENST00000509900 TMEM200CA6NKL6 621 aa9.62□□□□□ -0.87
PTPN20-223ENST00000509900 C16orf96A6NNT2 1141 aa9.62□□□□□ -0.87
PTPN20-223ENST00000509900 A8MU76 341 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms