RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 RPL10LQ96L21 214 aaKnown RBP16.3■□□□□ 0.2
NDFIP1-204ENST00000509436 SEMA3CQ99985 751 aa16.3■□□□□ 0.2
NDFIP1-204ENST00000509436 POLMQ9NP87 494 aaPredicted RBP16.3■□□□□ 0.2
NDFIP1-204ENST00000509436 EIF2B3Q9NR50 452 aaKnown RBP16.3■□□□□ 0.2
NDFIP1-204ENST00000509436 MGAQ8IWI9 3026 aa16.3■□□□□ 0.2
NDFIP1-204ENST00000509436 UQCRHLA0A096LP55 91 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 PRRT4C9JH25 899 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 F5H423 210 aaPredicted RBP16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 IGSF6O95976 241 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 CFIP05156 583 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 UQCRHP07919 91 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 SERPINF2P08697 491 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 TPSB2P20231 275 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 TNFRSF4P43489 277 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 ABCG1P45844 678 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 SNRPD1P62314 119 aaKnown RBP16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 SARNPP82979 210 aaKnown RBP16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 DSC2Q02487 901 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 CYP4F3Q08477 520 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 NAA30Q147X3 362 aaPredicted RBP16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 TPSAB1Q15661 275 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 DUOXA1Q1HG43 343 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 FAM182AQ5T1J6 154 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 RNASEH2BQ5TBB1 312 aaKnown RBP16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 ALG1LQ6GMV1 187 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 HIBCHQ6NVY1 386 aaPredicted RBP16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 WDR93Q6P2C0 686 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 C22orf39Q6P5X5 142 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 PPP1R21Q6ZMI0 780 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 SLCO6A1Q86UG4 719 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 PGBD5Q8N414 524 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 EIF1ADQ8N9N8 165 aaKnown RBP16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 KDM1BQ8NB78 822 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 SORCS1Q8WY21 1168 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 CPT1BQ92523 772 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 IMP4Q96G21 291 aaKnown RBP16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 ZNF419Q96HQ0 510 aaPredicted RBP16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 NUDCD1Q96RS6 583 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 PARD6BQ9BYG5 372 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 GRHL1Q9NZI5 618 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 LHX3Q9UBR4 397 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 MTRF1LQ9UGC7 380 aaKnown RBP16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 SHOC2Q9UQ13 582 aa16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 APOBEC2Q9Y235 224 aaKnown RBP16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 FARP1Q9Y4F1 1045 aaPredicted RBP16.29■□□□□ 0.2
NDFIP1-204ENST00000509436 PTPRQQ9UMZ3 2332 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 K7ERQ8 282 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 MUSKO15146 869 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 INSIG1O15503 277 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 SMAD6O43541 496 aaKnown RBP16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 ATP9BO43861 1147 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 GSRP00390 522 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 APRTP07741 180 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 ITPKAP23677 461 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 CD86P42081 329 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 MAGEA6P43360 314 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 TNNT3P45378 269 aaPredicted RBP16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 RECQLP46063 649 aaPredicted RBP16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 SCNN1BP51168 640 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 PLTPP55058 493 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 CDK16Q00536 496 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 MPP3Q13368 585 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 CAMK2BQ13554 666 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 KCNJ11Q14654 390 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 DLG2Q15700 870 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 SLC14A2Q15849 920 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 FNDC3BQ53EP0 1204 aaKnown RBP16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 LYSMD4Q5XG99 296 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 FRMD1Q8N878 549 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 OR2I1PQ8NGU4 316 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 ART4Q93070 314 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 EXOC2Q96KP1 924 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 MRGPRX3Q96LB0 322 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 GDAP1L1Q96MZ0 367 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 CLMPQ9H6B4 373 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 LRRC40Q9H9A6 602 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 FAM153AQ9UHL3 310 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 SLCO3A1Q9UIG8 710 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 RAB21Q9UL25 225 aa16.28■□□□□ 0.2
NDFIP1-204ENST00000509436 COL12A1Q99715 3063 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 ARHGAP33O14559 1287 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 NPC1O15118 1278 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 CBFA2T3O75081 653 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 AP2A1O95782 977 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 CR2P20023 1033 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 CA4P22748 312 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 CSNK1DP48730 415 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 CARSP49589 748 aaKnown RBP16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 AP1S1P61966 158 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 VSNL1P62760 191 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 RAD51Q06609 339 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 SRSF1Q07955 248 aaKnown RBP eCLIP16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 NIPAL4Q0D2K0 466 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 MESP2Q0VG99 397 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 TRADDQ15628 312 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 PTPRNQ16849 979 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 CEP128Q6ZU80 1094 aa16.27■□□□□ 0.2
NDFIP1-204ENST00000509436 SRLQ86TD4 932 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms