RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 ELOVL2Q9NXB9 296 aa12.67□□□□□ -0.38
LYSMD3-204ENST00000509384 HACD3Q9P035 362 aa12.67□□□□□ -0.38
LYSMD3-204ENST00000509384 EPS15L1Q9UBC2 864 aa12.67□□□□□ -0.38
LYSMD3-204ENST00000509384 RIMKLBQ9ULI2 386 aa12.67□□□□□ -0.38
LYSMD3-204ENST00000509384 KCTD3Q9Y597 815 aa12.67□□□□□ -0.38
LYSMD3-204ENST00000509384 SPO11Q9Y5K1 396 aa12.67□□□□□ -0.38
LYSMD3-204ENST00000509384 SZT2Q5T011 3432 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 PRRC2BQ5JSZ5 2229 aaKnown RBP12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 C2orf81A6NN90 581 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 POP4O95707 220 aaKnown RBP12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 SLC4A1P02730 911 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 SP100P23497 879 aaPredicted RBP12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 SLC8A1P32418 973 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 ABL2P42684 1182 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 ZNF140P52738 457 aaPredicted RBP12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 CSE1LP55060 971 aaKnown RBP12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 ACVR1Q04771 509 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 GRM3Q14832 879 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 ZNF470Q6ECI4 717 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 NEPROQ6NW34 567 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 CNTN4Q8IWV2 1026 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 PLPP6Q8IY26 295 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 TERB1Q8NA31 727 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 MDM1Q8TC05 714 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 CALML6Q8TD86 181 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 BCAS4Q8TDM0 211 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 FRS2Q8WU20 508 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 PIH1D2Q8WWB5 315 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 SUSD6Q92537 303 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 NXPE3Q969Y0 559 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 SERAC1Q96JX3 654 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 DNAJC1Q96KC8 554 aaKnown RBP12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 RBBP8Q99708 897 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 CPEB1Q9BZB8 566 aaKnown RBP12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 MFSD1Q9H3U5 465 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 GTSE1Q9NYZ3 720 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 GGT7Q9UJ14 662 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 SMG5Q9UPR3 1016 aaKnown RBP12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 NUMBLQ9Y6R0 609 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 REV3LO60673 3130 aa12.66□□□□□ -0.38
LYSMD3-204ENST00000509384 TTC34A8MYJ7 566 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 WASH3PC4AMC7 463 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 PRRT4C9JH25 899 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 H3BQ06 376 aaPredicted RBP12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 PRPF4O43172 522 aaKnown RBP eCLIP12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 SLC7A4O43246 635 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 TIMM44O43615 452 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 BUD23O43709 281 aaKnown RBP12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 SIN3BO75182 1162 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 SPAG7O75391 227 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 RPP40O75818 363 aaKnown RBP12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 ITGA2BP08514 1039 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 CHN1P15882 459 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 GJA4P35212 333 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 SPRP35270 261 aaPredicted RBP12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 MDH1P40925 334 aaKnown RBP12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 ARSDP51689 593 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 LIMK2P53671 638 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 TMPRSS15P98073 1019 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 PDE1BQ01064 536 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 GUCY1A3Q02108 690 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 MESP2Q0VG99 397 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 DNAJC3Q13217 504 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 PTPRNQ16849 979 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 UGP2Q16851 508 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 ITPRIPL2Q3MIP1 535 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 PREPLQ4J6C6 727 aaPredicted RBP12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 FNDC3BQ53EP0 1204 aaKnown RBP12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 OTUD6BQ8N6M0 293 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 ANKRD42Q8N9B4 389 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 MDGA1Q8NFP4 955 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 OR13C4Q8NGS5 318 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 OR2A12Q8NGT7 310 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 OR6P1Q8NGX9 317 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 PTPRN2Q92932 1015 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 HDAC10Q969S8 669 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 ALKBH8Q96BT7 664 aaKnown RBP12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 SMIM14Q96QK8 99 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 KLF6Q99612 283 aaPredicted RBP12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 RPP25Q9BUL9 199 aaKnown RBP12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 EPN3Q9H201 632 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 SSU72Q9NP77 194 aaKnown RBP12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 NKIRAS1Q9NYS0 192 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 PLA2G4CQ9UP65 541 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 ZNF711Q9Y462 761 aa12.65□□□□□ -0.38
LYSMD3-204ENST00000509384 HMX2A2RU54 273 aa12.64□□□□□ -0.39
LYSMD3-204ENST00000509384 TBC1D3BA6NDS4 549 aa12.64□□□□□ -0.39
LYSMD3-204ENST00000509384 FAM47DPA6NHR8 397 aa12.64□□□□□ -0.39
LYSMD3-204ENST00000509384 GOLGA8RI6L899 631 aa12.64□□□□□ -0.39
LYSMD3-204ENST00000509384 MYO1CO00159 1063 aa12.64□□□□□ -0.39
LYSMD3-204ENST00000509384 SOX1O00570 391 aaPredicted RBP12.64□□□□□ -0.39
LYSMD3-204ENST00000509384 CCL22O00626 93 aa12.64□□□□□ -0.39
LYSMD3-204ENST00000509384 AURKAO14965 403 aa12.64□□□□□ -0.39
LYSMD3-204ENST00000509384 UGT2B4P06133 528 aa12.64□□□□□ -0.39
LYSMD3-204ENST00000509384 CTPS1P17812 591 aa12.64□□□□□ -0.39
LYSMD3-204ENST00000509384 LPOP22079 712 aaPredicted RBP12.64□□□□□ -0.39
LYSMD3-204ENST00000509384 OPRD1P41143 372 aa12.64□□□□□ -0.39
LYSMD3-204ENST00000509384 EIF2DP41214 584 aaKnown RBP12.64□□□□□ -0.39
LYSMD3-204ENST00000509384 SLC1A2P43004 574 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms