RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 POLNQ7Z5Q5 900 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 SRLQ86TD4 932 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 LMX1AQ8TE12 382 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 CXorf40AQ8TE69 158 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 HSPH1Q92598 858 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 CCDC97Q96F63 343 aaPredicted RBP10.99□□□□□ -0.65
RNF4-212ENST00000509258 TBATAQ96M53 351 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 SMIM14Q96QK8 99 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 PACSIN1Q9BY11 444 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 CLPBQ9H078 707 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 SUV39H2Q9H5I1 410 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 ZWILCHQ9H900 591 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 CPNE5Q9HCH3 593 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 APOBEC3BQ9UH17 382 aaKnown RBP10.99□□□□□ -0.65
RNF4-212ENST00000509258 CAPN11Q9UMQ6 739 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 DOLKQ9UPQ8 538 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 SATB2Q9UPW6 733 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 PCDHGA8Q9Y5G5 932 aa10.99□□□□□ -0.65
RNF4-212ENST00000509258 COL6A6A6NMZ7 2263 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 A0A0U1RQS6 177 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 A0A1W2PNU3 283 aaPredicted RBP10.98□□□□□ -0.65
RNF4-212ENST00000509258 CPED1A4D0V7 1026 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 EME2A4GXA9 379 aaPredicted RBP10.98□□□□□ -0.65
RNF4-212ENST00000509258 ARHGAP42A6NI28 874 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 TRAFD1O14545 582 aaPredicted RBP10.98□□□□□ -0.65
RNF4-212ENST00000509258 C6P13671 934 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 IL4RP24394 825 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 HTR7P34969 479 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 MMP12P39900 470 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 MLLT3P42568 568 aaPredicted RBP10.98□□□□□ -0.65
RNF4-212ENST00000509258 SUOXP51687 545 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 UBASH3AP57075 661 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 VAC14Q08AM6 782 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 ELP6Q0PNE2 266 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 GRM3Q14832 879 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 DPYSL2Q16555 572 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 UGP2Q16851 508 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 ATP13A4Q4VNC1 1196 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 CFAP58Q5T655 872 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 ARHGAP40Q5TG30 622 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 ESRP1Q6NXG1 681 aaKnown RBP10.98□□□□□ -0.65
RNF4-212ENST00000509258 SFTPA2Q8IWL1 248 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 PLA2G15Q8NCC3 412 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 ATL2Q8NHH9 583 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 LRRN4Q8WUT4 740 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 SNRNP27Q8WVK2 155 aaKnown RBP10.98□□□□□ -0.65
RNF4-212ENST00000509258 SCG3Q8WXD2 468 aaKnown RBP10.98□□□□□ -0.65
RNF4-212ENST00000509258 ECHDC3Q96DC8 303 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 ATXN7L3BQ96GX2 97 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 CSPG4P5Q96PW8 444 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 NCAPGQ9BPX3 1015 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.98□□□□□ -0.65
RNF4-212ENST00000509258 LRRC61Q9BV99 259 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 NUP85Q9BW27 656 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 SLC13A1Q9BZW2 595 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 XPO4Q9C0E2 1151 aaKnown RBP10.98□□□□□ -0.65
RNF4-212ENST00000509258 PCDH18Q9HCL0 1135 aa10.98□□□□□ -0.65
RNF4-212ENST00000509258 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.98□□□□□ -0.65
RNF4-212ENST00000509258 PMS2P1A4D2B8 440 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 A8MX80 341 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 J3QKU1 62 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 PALMO75781 387 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 RNF8O76064 485 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 MAP3K6O95382 1288 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 SERPING1P05155 500 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 CYP1A2P05177 515 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 ANXA6P08133 673 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 MYBL1P10243 752 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 CR2P20023 1033 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 HTR1BP28222 390 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 CASP14P31944 242 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 PCK1P35558 622 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 EIF4A3P38919 411 aaKnown RBP10.97□□□□□ -0.65
RNF4-212ENST00000509258 HCAR3P49019 387 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 LIG3P49916 1009 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 ARSEP51690 589 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 TAS2R40P59535 323 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 ZBED6P86452 979 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 IL10RBQ08334 325 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 ALG11Q2TAA5 492 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 PRRT3Q5FWE3 981 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 PERM1Q5SV97 790 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 C6orf132Q5T0Z8 1188 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 PPP1R2P3Q6NXS1 205 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 CRTC1Q6UUV9 634 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 PHACTR4Q8IZ21 702 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 ARL14Q8N4G2 192 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 SYN2Q92777 582 aaPredicted RBP10.97□□□□□ -0.65
RNF4-212ENST00000509258 TSACCQ96A04 125 aaPredicted RBP10.97□□□□□ -0.65
RNF4-212ENST00000509258 SLC46A1Q96NT5 459 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 BOCQ9BWV1 1114 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 SP110Q9HB58 689 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 ANAPC7Q9UJX3 599 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 ATP8A1Q9Y2Q0 1164 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 OR1A2Q9Y585 309 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 ENTPD2Q9Y5L3 495 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 SCINQ9Y6U3 715 aa10.97□□□□□ -0.65
RNF4-212ENST00000509258 TENM4Q6N022 2769 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 TMEM110-MUSTN1A8MSY1 372 aa10.96□□□□□ -0.65
RNF4-212ENST00000509258 EIF3CLB5ME19 914 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms