RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGN1P11-201ENST00000508668 POLR3BQ9NW08 1133 aaPredicted RBP3.89□□□□□ -1.79
HMGN1P11-201ENST00000508668 C2orf42Q9NWW7 574 aa3.89□□□□□ -1.79
HMGN1P11-201ENST00000508668 RAB20Q9NX57 234 aa3.89□□□□□ -1.79
HMGN1P11-201ENST00000508668 ELOVL2Q9NXB9 296 aa3.89□□□□□ -1.79
HMGN1P11-201ENST00000508668 FTSJ1Q9UET6 329 aa3.89□□□□□ -1.79
HMGN1P11-201ENST00000508668 SLC25A13Q9UJS0 675 aa3.89□□□□□ -1.79
HMGN1P11-201ENST00000508668 SCML1Q9UN30 329 aa3.89□□□□□ -1.79
HMGN1P11-201ENST00000508668 HBS1LQ9Y450 684 aaKnown RBP3.89□□□□□ -1.79
HMGN1P11-201ENST00000508668 RAD54BQ9Y620 910 aa3.89□□□□□ -1.79
HMGN1P11-201ENST00000508668 OTOGLQ3ZCN5 2332 aa3.89□□□□□ -1.79
HMGN1P11-201ENST00000508668 CEP250Q9BV73 2442 aa3.89□□□□□ -1.79
HMGN1P11-201ENST00000508668 NCOR2Q9Y618 2525 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 COL4A3Q01955 1670 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 CFAP54Q96N23 3096 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TBC1D3DA0A087WVF3 549 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TBC1D3IA0A087WXS9 549 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TBC1D3EA0A087X179 549 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TBC1D3KA0A087X1G2 549 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 IGHV1OR15-9A0A0B4J2B8 117 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TBC1D3FA6NER0 549 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TBC1D3LB9A6J9 549 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 C1QTNF3-AMACRE9PGA6 284 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 F5H5T6 163 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 M0QYV0 167 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 XPO1O14980 1071 aaKnown RBP3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 MDM4O15151 490 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 BRINP1O60477 761 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TRIM13O60858 407 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TBL1XO60907 577 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 STC2O76061 302 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZNF202O95125 648 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 SEMA4FO95754 770 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 LATS1O95835 1130 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TBX18O95935 607 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 MOCS2O96007 188 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 KNG1P01042 644 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TBC1D3HP0C7X1 549 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 ALPPL2P10696 532 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 HNRNPLP14866 589 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 JUPP14923 745 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 BMP7P18075 431 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 CASP1P29466 404 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 LSP1P33241 339 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 ACADSBP45954 432 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 KCNC1P48547 511 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TPMTP51580 245 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TBX4P57082 545 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 ROM1Q03395 351 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 LRRC63Q05C16 580 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 SULT2A1Q06520 285 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 INCA1Q0VD86 236 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 ADIGQ0VDE8 80 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 GRIK2Q13002 908 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 CUL2Q13617 745 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZNF234Q14588 700 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 STAT4Q14765 748 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 SYCP1Q15431 976 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TERF2Q15554 542 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 CCDC142Q17RM4 750 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 FUT11Q495W5 492 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 BROXQ5VW32 411 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 NAIF1Q69YI7 327 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TBC1D3GQ6DHY5 549 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TBC1D3CQ6IPX1 549 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 SPOPLQ6IQ16 392 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 KLHL10Q6JEL2 608 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TMEM270Q6UE05 265 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 LRRC31Q6UY01 552 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 KRBA2Q6ZNG9 492 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 LCNL1Q6ZST4 164 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 LHFPL2Q6ZUX7 228 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 PRPF39Q86UA1 669 aaKnown RBP3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 PIGZQ86VD9 579 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZNF761Q86XN6 746 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZNF354CQ86Y25 554 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 PHYKPLQ8IUZ5 450 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 FMNL3Q8IVF7 1028 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TBC1D3Q8IZP1 549 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 CPXM2Q8N436 756 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 CHCHD4Q8N4Q1 142 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 ATP6V0D2Q8N8Y2 350 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 NUDT10Q8NFP7 164 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 OLIG1Q8TAK6 271 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TAS1R2Q8TE23 839 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 NXPE2Q96DL1 559 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 NUDT11Q96G61 164 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 SCYL1Q96KG9 808 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 MRGPRX1Q96LB2 322 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 GSDMAQ96QA5 445 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 MED15Q96RN5 788 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 SMOQ99835 787 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 FOXB1Q99853 325 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 GABRG3Q99928 467 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 BTBD2Q9BX70 525 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 FGFBP2Q9BYJ0 223 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 MIS12Q9H081 205 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 TMEM168Q9H0V1 697 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 OR10A5Q9H207 317 aa3.88□□□□□ -1.79
HMGN1P11-201ENST00000508668 POFUT1Q9H488 388 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms