RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ZNF385AQ96PM9 386 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 PPCSQ9HAB8 311 aa5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 NOX4Q9NPH5 578 aa5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 HSF4Q9ULV5 492 aa5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 NFE2L3Q9Y4A8 694 aa5.34□□□□□ -1.55
TOPBP1-206ENST00000508524 GOLGA6L10A0A0M3HER8 536 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 TEX22C9J3V5 150 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 KDM4BO94953 1096 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 NDUFB4O95168 129 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 F7P08709 466 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 CHATP28329 748 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 GPD2P43304 727 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 KRTAP24-1Q3LI83 254 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 SERTAD4-AS1Q5TG53 156 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 LRRC8EQ6NSJ5 796 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 USP43Q70EL4 1123 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 NOXA1Q86UR1 476 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 NAGSQ8N159 534 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 MUC20Q8N307 709 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 SORCS1Q8WY21 1168 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 MTBPQ96DY7 904 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 OR1F2PQ96R84 312 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 TTYH1Q9H313 450 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 DDX4Q9NQI0 724 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 DONSONQ9NYP3 566 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 CISD1Q9NZ45 108 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 IL1RAPL1Q9NZN1 696 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 MDFICQ9P1T7 246 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 KIAA1456Q9P272 454 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 CDC14AQ9UNH5 594 aa5.33□□□□□ -1.56
TOPBP1-206ENST00000508524 PLB1Q6P1J6 1458 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 PRAC2D3DTV9 90 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 EIF3FO00303 357 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 NDUFS7O75251 213 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 CLDN14O95500 239 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 URODP06132 367 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 HNRNPH1P31943 449 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 EFNA5P52803 228 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 ECT2LQ008S8 904 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 TDGQ13569 410 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 OASLQ15646 514 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 ZNF766Q5HY98 468 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 GPAT4Q86UL3 456 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 LRRTM4Q86VH4 590 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 ANKRD42Q8N9B4 389 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 TNIP2Q8NFZ5 429 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 CREB3L4Q8TEY5 395 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 NR4A3Q92570 626 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 CSF3RQ99062 836 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 MXRA8Q9BRK3 442 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 NUF2Q9BZD4 464 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 SMYD2Q9NRG4 433 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 BABAM1Q9NWV8 329 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 TMEM160Q9NX00 188 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 SMARCAL1Q9NZC9 954 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 CTNNAL1Q9UBT7 734 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 CARD8Q9Y2G2 431 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 SNX9Q9Y5X1 595 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 MADDQ8WXG6 1647 aa5.32□□□□□ -1.56
TOPBP1-206ENST00000508524 CUL7Q14999 1698 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 CLGNO14967 610 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 GRID2O43424 1007 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 HEXAP06865 529 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 UMODP07911 640 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 LINC00271P0C7V0 271 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 EFNB1P98172 346 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 GRIK3Q13003 919 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 AMZ1Q400G9 498 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 PPP6R3Q5H9R7 873 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 PAPPA-AS1Q5QFB9 102 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 GFI1BQ5VTD9 330 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 TADA2BQ86TJ2 420 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 ANKRD18AQ8IVF6 992 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 SPATA22Q8NHS9 363 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 TRIM63Q969Q1 353 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 INPP4AQ96PE3 977 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 ZNF224Q9NZL3 707 aa5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.31□□□□□ -1.56
TOPBP1-206ENST00000508524 ERICH3Q5RHP9 1530 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 BMPR1BO00238 502 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 PLGP00747 810 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 IGLV2-11P01706 119 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 GPTP24298 496 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 PSMC2P35998 433 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 PGM1P36871 562 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 ZNF155Q12901 538 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 TAF11Q15544 211 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 B3GNT6Q6ZMB0 384 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 SMIM29Q86T20 159 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 TMTC1Q8IUR5 882 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 ZNF441Q8N8Z8 693 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 POC1AQ8NBT0 407 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 GCC1Q96CN9 775 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 C3orf30Q96M34 536 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 LBHD1Q9BQE6 289 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 EBF2Q9HAK2 575 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 BEX4Q9NWD9 120 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 HSPB7Q9UBY9 170 aa5.3□□□□□ -1.56
TOPBP1-206ENST00000508524 TEX14Q8IWB6 1497 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms