RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 RFTN1Q14699 578 aaPredicted RBP16.31■□□□□ 0.2
LMNA-222ENST00000508500 ALG11Q2TAA5 492 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 BOLA3Q53S33 107 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 FAXCQ5TGI0 409 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 LIPIQ6XZB0 460 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 EFL1Q7Z2Z2 1120 aaKnown RBP16.31■□□□□ 0.2
LMNA-222ENST00000508500 LZTR1Q8N653 840 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 ANP32BQ92688 251 aaKnown RBP16.31■□□□□ 0.2
LMNA-222ENST00000508500 TBATAQ96M53 351 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 IL12RB2Q99665 862 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 C1QTNF7Q9BXJ2 289 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 ATP13A3Q9H7F0 1226 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.31■□□□□ 0.2
LMNA-222ENST00000508500 OR1A2Q9Y585 309 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 BZW2Q9Y6E2 419 aaKnown RBP16.31■□□□□ 0.2
LMNA-222ENST00000508500 CFAP46Q8IYW2 2715 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 ATMQ13315 3056 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 CFAP69A5D8W1 941 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 A8MX80 341 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 LMO7DNF2Z398 122 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 H3BRJ5 948 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 LZTS3O60299 673 aaPredicted RBP16.3■□□□□ 0.2
LMNA-222ENST00000508500 RECQL5O94762 991 aaPredicted RBP16.3■□□□□ 0.2
LMNA-222ENST00000508500 CD48P09326 243 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 HK3P52790 923 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 BCL2L1Q07817 233 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 MMRN1Q13201 1228 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 NFATC4Q14934 902 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 PTPRRQ15256 657 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 TCEA2Q15560 299 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 ATP13A4Q4VNC1 1196 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 C6orf132Q5T0Z8 1188 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 TMCO4Q5TGY1 634 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 ERAP2Q6P179 960 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 CRTC1Q6UUV9 634 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 DPPA4Q7L190 304 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 FAM71BQ8TC56 605 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 ZNF599Q96NL3 588 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 NUP85Q9BW27 656 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 PRORYQ9H606 182 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 IFNKQ9P0W0 207 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 SEPT3Q9UH03 358 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 ANAPC7Q9UJX3 599 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 PCDHGC4Q9Y5F7 938 aa16.3■□□□□ 0.2
LMNA-222ENST00000508500 HTRA2O43464 458 aaPredicted RBP16.29■□□□□ 0.2
LMNA-222ENST00000508500 CSO75390 466 aaKnown RBP16.29■□□□□ 0.2
LMNA-222ENST00000508500 PCCBP05166 539 aa16.29■□□□□ 0.2
LMNA-222ENST00000508500 ARL4AP40617 200 aa16.29■□□□□ 0.2
LMNA-222ENST00000508500 ARSEP51690 589 aa16.29■□□□□ 0.2
LMNA-222ENST00000508500 AP1S1P61966 158 aa16.29■□□□□ 0.2
LMNA-222ENST00000508500 CFAP58Q5T655 872 aa16.29■□□□□ 0.2
LMNA-222ENST00000508500 TMCO3Q6UWJ1 677 aa16.29■□□□□ 0.2
LMNA-222ENST00000508500 ENPP7Q6UWV6 458 aa16.29■□□□□ 0.2
LMNA-222ENST00000508500 HID1Q8IV36 788 aa16.29■□□□□ 0.2
LMNA-222ENST00000508500 SNIP1Q8TAD8 396 aaKnown RBP16.29■□□□□ 0.2
LMNA-222ENST00000508500 MAPK15Q8TD08 544 aa16.29■□□□□ 0.2
LMNA-222ENST00000508500 TEKT4Q8WW24 435 aa16.29■□□□□ 0.2
LMNA-222ENST00000508500 SPOCK2Q92563 424 aa16.29■□□□□ 0.2
LMNA-222ENST00000508500 SLC13A1Q9BZW2 595 aa16.29■□□□□ 0.2
LMNA-222ENST00000508500 SETXQ7Z333 2677 aaKnown RBP16.28■□□□□ 0.2
LMNA-222ENST00000508500 TMEM202A6NGA9 273 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 TMEM110-MUSTN1A8MSY1 372 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 USP12O75317 370 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 C1QL1O75973 258 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 MPOP05164 745 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 ANXA6P08133 673 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 CASP14P31944 242 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 RENBPP51606 427 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 MAXP61244 160 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 TPM4P67936 248 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 TRAF2Q12933 501 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 MTM1Q13496 603 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 IHHQ14623 411 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 NR0B2Q15466 257 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 ISXQ2M1V0 245 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 TBC1D25Q3MII6 688 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 CCDC122Q5T0U0 273 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 ALKBH5Q6P6C2 394 aaKnown RBP16.28■□□□□ 0.2
LMNA-222ENST00000508500 RD3Q7Z3Z2 195 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 CBARPQ8N350 705 aaPredicted RBP16.28■□□□□ 0.2
LMNA-222ENST00000508500 PDXPQ96GD0 296 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 DEPDC7Q96QD5 511 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 NUDCD1Q96RS6 583 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 MGME1Q9BQP7 344 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 LGR4Q9BXB1 951 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 NOD2Q9HC29 1040 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 B4GALT6Q9UBX8 382 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 IP6K2Q9UHH9 426 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 RABGEF1Q9UJ41 708 aa16.28■□□□□ 0.2
LMNA-222ENST00000508500 LUC7L2Q9Y383 392 aaKnown RBP16.28■□□□□ 0.2
LMNA-222ENST00000508500 PMS2P1A4D2B8 440 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 GOLGA6L19H0YKK7 550 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 RASGRP1O95267 797 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 HNRNPH3P31942 346 aaKnown RBP16.27■□□□□ 0.2
LMNA-222ENST00000508500 TRIM23P36406 574 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 PDX1P52945 283 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 SRP54P61011 504 aaKnown RBP16.27■□□□□ 0.2
LMNA-222ENST00000508500 CNGA3Q16281 694 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 SFTPA2Q8IWL1 248 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 PCDH19Q8TAB3 1148 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms