RNA–Protein interactions for RNA: ENST00000508350.1

CDH18-208, Transcript of cadherin 18, human

TSL 4

Gene CDH18, Length 578 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH18-208	ENST00000508350	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	ZNF567	Q8N184	647 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	FAM71D	Q8N9W8	422 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	GLIS1	Q8NBF1	620 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	TRIM58	Q8NG06	486 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	OR2I1P	Q8NGU4	316 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	ARRDC2	Q8TBH0	407 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	CCDC110	Q8TBZ0	833 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	PDCD6IP	Q8WUM4	868 aa	Known RBP	4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	NSMCE1	Q8WV22	266 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	TFB1M	Q8WVM0	346 aa	Known RBP	4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	CASKIN2	Q8WXE0	1202 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	PIGK	Q92643	395 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	TCEAL3	Q969E4	200 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	NKD2	Q969F2	451 aa	Predicted RBP	4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	BIRC7	Q96CA5	298 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	HDAC11	Q96DB2	347 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	ZC3H10	Q96K80	434 aa	Known RBP	4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	SPACA7	Q96KW9	195 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	CCDC114	Q96M63	670 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	ZNF599	Q96NL3	588 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	ALS2CR12	Q96Q35	445 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	NUDCD1	Q96RS6	583 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	IL12RB2	Q99665	862 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	MGME1	Q9BQP7	344 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	GORASP1	Q9BQQ3	440 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	ORAI3	Q9BRQ5	295 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	TMEM121	Q9BTD3	319 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	WRAP53	Q9BUR4	548 aa	Known RBP	4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	AP1M1	Q9BXS5	423 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	HDAC8	Q9BY41	377 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	MIR1-1HG	Q9H1L0	117 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	KCNH6	Q9H252	994 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	ARRDC1-AS1	Q9H2J1	176 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	SUV39H2	Q9H5I1	410 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	FBRS	Q9HAH7	460 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	USP29	Q9HBJ7	922 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	FZD3	Q9NPG1	666 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	PCDH12	Q9NPG4	1184 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	EIF2B4	Q9UI10	523 aa	Known RBP	4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	DNPEP	Q9ULA0	475 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	ZFR2	Q9UPR6	939 aa	Known RBP	4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	CHKB	Q9Y259	395 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	ATP8A1	Q9Y2Q0	1164 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	COQ6	Q9Y2Z9	468 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	RAI2	Q9Y5P3	530 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	FADS3	Q9Y5Q0	445 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	PLXNA2	O75051	1894 aa		4.56	□□□□□ -1.68
CDH18-208	ENST00000508350	CXorf51A	A0A1B0GTR3	108 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	TSPAN11	A1L157	253 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	BCLAF3	A2AJT9	711 aa	Known RBP	4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	IGLON5	A6NGN9	336 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	METTL12	A8MUP2	240 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	UPK3BL1	B0FP48	263 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	C10orf142	B7Z368	130 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	UPK3BL2	E5RIL1	263 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	PROB1	E7EW31	1015 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	PDE2A	O00408	941 aa	Predicted RBP	4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	TRAFD1	O14545	582 aa	Predicted RBP	4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	PPP1R12A	O14974	1030 aa	Predicted RBP	4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	AREL1	O15033	823 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	RAD51B	O15315	384 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	HTRA2	O43464	458 aa	Predicted RBP	4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	PLRG1	O43660	514 aa	Known RBP	4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	LIAS	O43766	372 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	NEBL	O76041	1014 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	RHOBTB1	O94844	696 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	EPN2	O95208	641 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	PGLS	O95336	258 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	ALPI	P09923	528 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	PIRT	P0C851	137 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	ZSCAN5DP	P0CG00	497 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	ETS1	P14921	441 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	NFKB1	P19838	968 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	TGM1	P22735	817 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	PSMB4	P28070	264 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	OXTR	P30559	389 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	CNR2	P34972	360 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	CETN2	P41208	172 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	CHRNA4	P43681	627 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	CSNK1D	P48730	415 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	CSNK1E	P49674	416 aa	Known RBP	4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	NEK3	P51956	506 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	TERF1	P54274	439 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	CLDN2	P57739	230 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	AP1S1	P61966	158 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	FAM193A	P78312	1265 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	BNC1	Q01954	994 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	RAD51	Q06609	339 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	ZNF33A	Q06730	810 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	BCL2L1	Q07817	233 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	SPEM2	Q0P670	501 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	BYSL	Q13895	437 aa	Known RBP	4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	HNRNPD	Q14103	355 aa	Known RBP	4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	GALNT3	Q14435	633 aa		4.55	□□□□□ -1.68
CDH18-208	ENST00000508350	SPARCL1	Q14515	664 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms