RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 GP1BAP07359 652 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 JUPP14923 745 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 POLR2LP62875 67 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 DAB2P98082 770 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 E2F1Q01094 437 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 GALNT2Q10471 571 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 MTM1Q13496 603 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 KRT81Q14533 505 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 ZNF235Q14590 738 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 PDK2Q15119 407 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 HADHQ16836 314 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 HS1BP3Q53T59 392 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 CFAP58Q5T655 872 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 CDCP2Q5VXM1 449 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 NCBP2-AS2Q69YL0 99 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 ALG1LQ6GMV1 187 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 ZCCHC8Q6NZY4 707 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 PHACTR4Q8IZ21 702 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 DCBLD1Q8N8Z6 715 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 PCDH19Q8TAB3 1148 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 BTN2A2Q8WVV5 523 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 CTNNBL1Q8WYA6 563 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 FATE1Q969F0 183 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 CCDC97Q96F63 343 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 CHP1Q99653 195 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 APOOQ9BUR5 198 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 LRRC61Q9BV99 259 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 BOCQ9BWV1 1114 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 CLPBQ9H078 707 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 NOD2Q9HC29 1040 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 SPASTQ9UBP0 616 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 APOBEC3BQ9UH17 382 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 SALL4Q9UJQ4 1053 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 URB1O60287 2271 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 SHROOM3Q8TF72 1996 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 WDFY3Q8IZQ1 3526 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 DSPP15924 2871 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 FREM2Q5SZK8 3169 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 A0A1W2PQ67 120 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 TTC24A2A3L6 582 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 LMO7DNF2Z398 122 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 OPA1O60313 960 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 RECQL5O94762 991 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 MTA2O94776 668 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 ELFN1P0C7U0 828 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 MYF5P13349 255 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 TRIM23P36406 574 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 GARSP41250 739 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 MMP13P45452 471 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 DUSP3P51452 185 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 HK3P52790 923 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 ADKP55263 362 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 MAXP61244 160 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 SEMG2Q02383 582 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 PPARDQ03181 441 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 CYP4F3Q08477 520 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 TRAF2Q12933 501 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 TARDBPQ13148 414 aaKnown RBP eCLIP9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 TBX2Q13207 712 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 IHHQ14623 411 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 INPP5AQ14642 412 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 NFATC4Q14934 902 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 RTP5Q14D33 572 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 ALG11Q2TAA5 492 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 DEFB133Q30KQ1 61 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 ANKRD20A8PQ5CZ79 823 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 PRRT3Q5FWE3 981 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 MARC1Q5VT66 337 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 NYAP1Q6ZVC0 841 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 CBARPQ8N350 705 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 BBS5Q8N3I7 341 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 PIP4P2Q8N4L2 257 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 PQLC3Q8N755 202 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 PLA2G15Q8NCC3 412 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 RNF214Q8ND24 703 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 LMX1AQ8TE12 382 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 MAML1Q92585 1016 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 NXPE2Q96DL1 559 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 COQ10AQ96MF6 247 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 TSGA13Q96PP4 275 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 MCCC1Q96RQ3 725 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 NRSN2Q9GZP1 204 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 NCKIPSDQ9NZQ3 722 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 B4GALT6Q9UBX8 382 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 PPIL1Q9Y3C6 166 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 GPSM3Q9Y4H4 160 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 PCDHGC4Q9Y5F7 938 aa9.11□□□□□ -0.95
PDLIM5-209ENST00000506632 RP1P56715 2156 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 CFAP47Q6ZTR5 3102 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 EME2A4GXA9 379 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 ZNF487B1APH4 448 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 MATN3O15232 486 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 AKR1B10O60218 316 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 FZD6O60353 706 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 HEXIM1O94992 359 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 PGLSO95336 258 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 MT-CO3P00414 261 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 CPP00450 1065 aa9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 CELA2BP08218 269 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-209ENST00000506632 KRT7P08729 469 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms