RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 LRG1P02750 347 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 NQO1P15559 274 aaKnown RBP12.25□□□□□ -0.45
LIN54-206ENST00000506560 STMN1P16949 149 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 ZBTB16Q05516 673 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 TMEM240Q5SV17 173 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 ZNF549Q6P9A3 640 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 TRIM42Q8IWZ5 723 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 GBP7Q8N8V2 638 aaPredicted RBP12.25□□□□□ -0.45
LIN54-206ENST00000506560 HEXDCQ8WVB3 486 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 PPP1R36Q96LQ0 422 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 ZNF599Q96NL3 588 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 C17orf80Q9BSJ5 609 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 TDRD1Q9BXT4 1180 aaKnown RBP12.25□□□□□ -0.45
LIN54-206ENST00000506560 BPIFA1Q9NP55 256 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 SCUBE2Q9NQ36 999 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 TRANK1O15050 2925 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 TARM1B6A8C7 271 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 BAIAP3O94812 1187 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 LUC7L3O95232 432 aaKnown RBP12.25□□□□□ -0.45
LIN54-206ENST00000506560 NDST3O95803 873 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 FGF1P05230 155 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 KCNA5P22460 613 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 NTHL1P78549 312 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 SLC12A1Q13621 1099 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 CDH18Q13634 790 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 CCDC153Q494R4 210 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 ACBD5Q5T8D3 534 aaPredicted RBP12.25□□□□□ -0.45
LIN54-206ENST00000506560 ZNF697Q5TEC3 545 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 LRRC8EQ6NSJ5 796 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 HERC6Q8IVU3 1022 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 EFHBQ8N7U6 833 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 OR4K2Q8NGD2 314 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 FBXO27Q8NI29 283 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 MAPK15Q8TD08 544 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 ZNF398Q8TD17 642 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 DDI1Q8WTU0 396 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 CLP1Q92989 425 aaKnown RBP12.25□□□□□ -0.45
LIN54-206ENST00000506560 FAM167BQ9BTA0 163 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 LHX3Q9UBR4 397 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 ACOT9Q9Y305 439 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 RAI2Q9Y5P3 530 aa12.25□□□□□ -0.45
LIN54-206ENST00000506560 DLX3O60479 287 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 CD1EP15812 388 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 HLA-DPA1P20036 260 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 ABL2P42684 1182 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 LEPRP48357 1165 aaKnown RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 ALDH18A1P54886 795 aaKnown RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 ABCE1P61221 599 aaKnown RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 TIAL1Q01085 375 aaKnown RBP eCLIP12.24□□□□□ -0.459e-7■■■■□ 23.8
LIN54-206ENST00000506560 UBAP2LQ14157 1087 aaKnown RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 HECTD2Q5U5R9 776 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 MFN1Q8IWA4 741 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 TDRD5Q8NAT2 981 aaKnown RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 PIWIL2Q8TC59 973 aaKnown RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 RPL10LQ96L21 214 aaKnown RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 MFSD1Q9H3U5 465 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 ARHGEF3Q9NR81 526 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 IGSF5Q9NSI5 407 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 NSMCE4AQ9NXX6 385 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 ZNF195O14628 629 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 MPSTP25325 297 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 CD70P32970 193 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 CTNNB1P35222 781 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 KCNC1P48547 511 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 PLK1P53350 603 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 SEMG2Q02383 582 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 TUBB3Q13509 450 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 UGP2Q16851 508 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 SLC5A9Q2M3M2 681 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 ITIH5Q86UX2 942 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 ST13P5Q8NFI4 369 aaPredicted RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 BRSK1Q8TDC3 778 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 MRPS31Q92665 395 aaKnown RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 CCDC97Q96F63 343 aaPredicted RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 MIPEPQ99797 713 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 FAM96AQ9H5X1 160 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 MAN1C1Q9NR34 630 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.24□□□□□ -0.45
LIN54-206ENST00000506560 INTS6Q9UL03 887 aaKnown RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 SLC7A4O43246 635 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 EFCAB14O75071 495 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 PAPSS2O95340 614 aaPredicted RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 CTPS1P17812 591 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 CTSOP43234 321 aaPredicted RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 NAGLUP54802 743 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 CAMK1Q14012 370 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 CMTM8Q8IZV2 173 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 TXNDC5Q8NBS9 432 aaKnown RBP12.24□□□□□ -0.45
LIN54-206ENST00000506560 POF1BQ8WVV4 589 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 EID2BQ96D98 161 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 CDKN2AIPNLQ96HQ2 116 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 OSBPL1AQ9BXW6 950 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 CYP4F12Q9HCS2 524 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 KLC4Q9NSK0 619 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 OXSMQ9NWU1 459 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 KCNK4Q9NYG8 393 aa12.24□□□□□ -0.45
LIN54-206ENST00000506560 GRXCR1A8MXD5 290 aa12.23□□□□□ -0.45
LIN54-206ENST00000506560 LEFTY2O00292 366 aa12.23□□□□□ -0.45
LIN54-206ENST00000506560 PER2O15055 1255 aa12.23□□□□□ -0.45
LIN54-206ENST00000506560 TRIM13O60858 407 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms