RNA–Protein interactions for RNA: ENST00000506556.1

THUMPD3P1-201, Transcript of THUMP domain containing 3 pseudogene 1, humanhuman

BASIC

Gene THUMPD3P1, Length 1,480 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3P1-201ENST00000506556 CDH12P55289 794 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 UBASH3AP57075 661 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 ARF3P61204 181 aaPredicted RBP3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 RPS3AP61247 264 aaKnown RBP3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 ARF1P84077 181 aaKnown RBP3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 MAMLD1Q13495 774 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 DCTN2Q13561 401 aaKnown RBP3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 ERV3-1Q14264 604 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 SLMAPQ14BN4 828 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 TWIST1Q15672 202 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 CCDC142Q17RM4 750 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 ASPHD1Q5U4P2 390 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 GALNT17Q6IS24 598 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 SLC30A6Q6NXT4 461 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 BRINP3Q76B58 766 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 GALNTL5Q7Z4T8 443 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 PIP4P1Q86T03 277 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 PALB2Q86YC2 1186 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 LURAP1LQ8IV03 231 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 DENND6AQ8IWF6 608 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 KIAA2013Q8IYS2 634 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 CADM3Q8N126 398 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 NAT8LQ8N9F0 302 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 CEP76Q8TAP6 659 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 TMEM163Q8TC26 289 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 SLC35F5Q8WV83 523 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 MSI2Q96DH6 328 aaKnown RBP3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 TRIM44Q96DX7 344 aaPredicted RBP3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 ZC3HAV1LQ96H79 300 aaKnown RBP3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 NLRP4Q96MN2 994 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 USP44Q9H0E7 712 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 SIL1Q9H173 461 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 GRPEL1Q9HAV7 217 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 ANKRD10Q9NXR5 420 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 TBC1D29Q9UFV1 150 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 FAM96BQ9Y3D0 163 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 GPRASP1Q5JY77 1395 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 ERCC6Q03468 1493 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 MROH2BQ7Z745 1585 aa3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 BAZ1AQ9NRL2 1556 aaPredicted RBP3.88□□□□□ -1.79
THUMPD3P1-201ENST00000506556 IGLV5-39A0A0G2JS06 123 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 PES1O00541 588 aaKnown RBP3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 SOCS2O14508 198 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 LDLRAD4O15165 306 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 NDUFB8O95169 186 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 EPN2O95208 641 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 TGDSO95455 350 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 STARD3NLO95772 234 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 MT-CYBP00156 380 aaPredicted RBP3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 TFP02787 698 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 PRF1P14222 555 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 CHRNB2P17787 502 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 CDH2P19022 906 aaPredicted RBP3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 RYKP34925 604 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 KCNJ4P48050 445 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 GNAQP50148 359 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 OLR1P78380 273 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 RNPS1Q15287 305 aaKnown RBP3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 DPCR1Q3MIW9 517 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 COLEC12Q5KU26 742 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 KLHL24Q6TFL4 600 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 PXKQ7Z7A4 578 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 PATL1Q86TB9 770 aaKnown RBP3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 GPSM1Q86YR5 675 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 RBFAQ8N0V3 343 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 CNTROBQ8N137 903 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 TEX9Q8N6V9 391 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 GABPB2Q8TAK5 448 aaPredicted RBP3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 JAKMIP2Q96AA8 810 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 BBS4Q96RK4 519 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 SIN3AQ96ST3 1273 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 MAP7D2Q96T17 732 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 PIP5K1AQ99755 562 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 BAG1Q99933 345 aaPredicted RBP3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 WDR77Q9BQA1 342 aaPredicted RBP3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 SLF1Q9BQI6 1058 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 ADPGKQ9BRR6 497 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 HEMGNQ9BXL5 484 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 MUC13Q9H3R2 512 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 MVB12BQ9H7P6 319 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 PCDHB16Q9NRJ7 776 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 ABCF3Q9NUQ8 709 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 POT1Q9NUX5 634 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 NSMCE4AQ9NXX6 385 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 RABL2AQ9UBK7 228 aaPredicted RBP3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 MTRRQ9UBK8 725 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 CFDP1Q9UEE9 299 aaPredicted RBP3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 NDRG3Q9UGV2 375 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 LIMA1Q9UHB6 759 aaKnown RBP3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 IKBKGQ9Y6K9 419 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 UTYO14607 1347 aa3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 SOS1Q07889 1333 aaPredicted RBP3.87□□□□□ -1.79
THUMPD3P1-201ENST00000506556 TMEM272A0A1B0GTI8 110 aa3.86□□□□□ -1.79
THUMPD3P1-201ENST00000506556 PPEF2O14830 753 aa3.86□□□□□ -1.79
THUMPD3P1-201ENST00000506556 HTATSF1O43719 755 aaKnown RBP3.86□□□□□ -1.79
THUMPD3P1-201ENST00000506556 DOK2O60496 412 aa3.86□□□□□ -1.79
THUMPD3P1-201ENST00000506556 CLDN7O95471 211 aa3.86□□□□□ -1.79
THUMPD3P1-201ENST00000506556 CLTBP09497 229 aa3.86□□□□□ -1.79
THUMPD3P1-201ENST00000506556 TFPIP10646 304 aa3.86□□□□□ -1.79
THUMPD3P1-201ENST00000506556 LAMP2P13473 410 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms