RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 SLC45A4Q5BKX6 768 aa17.93■□□□□ 0.46
SMN1-204ENST00000506163 ERAP2Q6P179 960 aa17.93■□□□□ 0.46
SMN1-204ENST00000506163 LIPIQ6XZB0 460 aa17.93■□□□□ 0.46
SMN1-204ENST00000506163 DPPA4Q7L190 304 aa17.93■□□□□ 0.46
SMN1-204ENST00000506163 ZC3H18Q86VM9 953 aaKnown RBP17.93■□□□□ 0.46
SMN1-204ENST00000506163 ZSCAN30Q86W11 494 aa17.93■□□□□ 0.46
SMN1-204ENST00000506163 CBARPQ8N350 705 aaPredicted RBP17.93■□□□□ 0.46
SMN1-204ENST00000506163 RNF10Q8N5U6 811 aaKnown RBP17.93■□□□□ 0.46
SMN1-204ENST00000506163 GDF3Q9NR23 364 aa17.93■□□□□ 0.46
SMN1-204ENST00000506163 BTBD3Q9Y2F9 522 aa17.93■□□□□ 0.46
SMN1-204ENST00000506163 PPIL1Q9Y3C6 166 aa17.93■□□□□ 0.46
SMN1-204ENST00000506163 PPP1R12AO14974 1030 aaPredicted RBP17.92■□□□□ 0.46
SMN1-204ENST00000506163 CBFA2T3O75081 653 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 LHCGRP22888 699 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 PTPN3P26045 913 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 PTPN7P35236 360 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 NOVA1P51513 510 aaKnown RBP17.92■□□□□ 0.46
SMN1-204ENST00000506163 PFN3P60673 137 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 COPS2P61201 443 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 POLR2LP62875 67 aaKnown RBP17.92■□□□□ 0.46
SMN1-204ENST00000506163 SKOR1P84550 965 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 WASHC5Q12768 1159 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 BNIP3Q12983 259 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 ARMC12Q5T9G4 340 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 PSAPL1Q6NUJ1 521 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 TXLNBQ8N3L3 684 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 P3H4Q92791 437 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 SKA1Q96BD8 255 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 HES6Q96HZ4 224 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 AGAP3Q96P47 875 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 OSBPL8Q9BZF1 889 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 BRD8Q9H0E9 1235 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 ERVMER34-1Q9H9K5 563 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 SEPT10Q9P0V9 454 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 PHTF1Q9UMS5 762 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 CHKBQ9Y259 395 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 PCDHGB2Q9Y5G2 931 aa17.92■□□□□ 0.46
SMN1-204ENST00000506163 TDRD6O60522 2096 aaKnown RBP17.92■□□□□ 0.46
SMN1-204ENST00000506163 SPEGQ15772 3267 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 GOLGA8CPA6NN73 597 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 CPP00450 1065 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 ALPIP09923 528 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 CTPS1P17812 591 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 CD68P34810 354 aaPredicted RBP17.91■□□□□ 0.46
SMN1-204ENST00000506163 CD86P42081 329 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 RXRGP48443 463 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 IRF4Q15306 451 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 TEX44Q53QW1 395 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 KYAT3Q6YP21 454 aaKnown RBP17.91■□□□□ 0.46
SMN1-204ENST00000506163 PTAR1Q7Z6K3 402 aaPredicted RBP17.91■□□□□ 0.46
SMN1-204ENST00000506163 TSPAN33Q86UF1 283 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 GATAD2AQ86YP4 633 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 SYCE1Q8N0S2 351 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 PELI3Q8N2H9 469 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 TFB1MQ8WVM0 346 aaKnown RBP17.91■□□□□ 0.46
SMN1-204ENST00000506163 MCCC1Q96RQ3 725 aaPredicted RBP17.91■□□□□ 0.46
SMN1-204ENST00000506163 FAM118BQ9BPY3 351 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 TDRD1Q9BXT4 1180 aaKnown RBP17.91■□□□□ 0.46
SMN1-204ENST00000506163 PNMA8BQ9ULN7 279 aaPredicted RBP17.91■□□□□ 0.46
SMN1-204ENST00000506163 EFR3BQ9Y2G0 817 aa17.91■□□□□ 0.46
SMN1-204ENST00000506163 NPIPB15A6NHN6 443 aaPredicted RBP17.9■□□□□ 0.46
SMN1-204ENST00000506163 A6NNZ2 444 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 APOC4-APOC2K7ER74 178 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 PCDHGA12O60330 932 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 RECQL5O94762 991 aaPredicted RBP17.9■□□□□ 0.46
SMN1-204ENST00000506163 APOC2P02655 101 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 KCNA4P22459 653 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 CES1P23141 567 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 FZD2Q14332 565 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 AGERQ15109 404 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 CNGA3Q16281 694 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 N4BP2L1Q5TBK1 243 aaPredicted RBP17.9■□□□□ 0.46
SMN1-204ENST00000506163 ZNF662Q6ZS27 426 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 NYAP1Q6ZVC0 841 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 ERMP1Q7Z2K6 904 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 KANSL1Q7Z3B3 1105 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 NAXDQ8IW45 347 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 PAF1Q8N7H5 531 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 DENND6BQ8NEG7 585 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 ACTL9Q8TC94 416 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 SAP25Q8TEE9 199 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 FUBP1Q96AE4 644 aaKnown RBP17.9■□□□□ 0.46
SMN1-204ENST00000506163 TADA1Q96BN2 335 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 SCRN2Q96FV2 425 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 IMP4Q96G21 291 aaKnown RBP17.9■□□□□ 0.46
SMN1-204ENST00000506163 TSGA10Q9BZW7 698 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 KLF15Q9UIH9 416 aa17.9■□□□□ 0.46
SMN1-204ENST00000506163 SPAARA0A1B0GVQ0 90 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 A0A1W2PQ67 120 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 TCRBV7S2A1N4TA0A589 114 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 CFAP69A5D8W1 941 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 FPGTO14772 594 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 DFNA5O60443 496 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 HEXIM1O94992 359 aaKnown RBP17.89■□□□□ 0.46
SMN1-204ENST00000506163 CEACAM1P13688 526 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 HNF1BP35680 557 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 CCT8P50990 548 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 OTUD4Q01804 1114 aaKnown RBP17.89■□□□□ 0.46
SMN1-204ENST00000506163 NOMO1Q15155 1222 aa17.89■□□□□ 0.46
SMN1-204ENST00000506163 ZNF542PQ5EBM4 170 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms