RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 GAS6Q14393 721 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 STARD3Q14849 445 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 SLMAPQ14BN4 828 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 UBXN2BQ14CS0 331 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 ZRSR2Q15696 482 aaKnown RBP7.24□□□□□ -1.25
NUP54-204ENST00000506098 CST6Q15828 149 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 CRY1Q16526 586 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 CDKN3Q16667 212 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 UGP2Q16851 508 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 FAM153CQ494X1 144 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 DNAJC21Q5F1R6 531 aaKnown RBP7.24□□□□□ -1.25
NUP54-204ENST00000506098 SPDYCQ5MJ68 293 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 FAM46CQ5VWP2 391 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 ICE2Q659A1 982 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 KIAA1211LQ6NV74 962 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 PKN3Q6P5Z2 889 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 EMBQ6PCB8 327 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 TMEM92Q6UXU6 159 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 CENPUQ71F23 418 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 CCNJLQ8IV13 435 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 RAVER1Q8IY67 606 aaKnown RBP7.24□□□□□ -1.25
NUP54-204ENST00000506098 NDUFAF2Q8N183 169 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 DNAAF3Q8N9W5 541 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 BRSK1Q8TDC3 778 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 PTCD2Q8WV60 388 aaKnown RBP7.24□□□□□ -1.25
NUP54-204ENST00000506098 PEX13Q92968 403 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 CAVIN3Q969G5 261 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 SCRN2Q96FV2 425 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 PPP1R16AQ96I34 528 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 PWWP2AQ96N64 755 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 NECAB3Q96P71 396 aaPredicted RBP7.24□□□□□ -1.25
NUP54-204ENST00000506098 MCCC1Q96RQ3 725 aaPredicted RBP7.24□□□□□ -1.25
NUP54-204ENST00000506098 APOL2Q9BQE5 337 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 NAT9Q9BTE0 207 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 HDAC8Q9BY41 377 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 CHRDQ9H2X0 955 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 TRABDQ9H4I3 376 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 SUDS3Q9H7L9 328 aaPredicted RBP7.24□□□□□ -1.25
NUP54-204ENST00000506098 MRM3Q9HC36 420 aaKnown RBP7.24□□□□□ -1.25
NUP54-204ENST00000506098 MAGEE1Q9HCI5 957 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 HACD3Q9P035 362 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 RIMKLBQ9ULI2 386 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 SCML1Q9UN30 329 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 ADAMTS9Q9P2N4 1935 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 VCANP13611 3396 aa7.24□□□□□ -1.25
NUP54-204ENST00000506098 CACNA1EQ15878 2313 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 UQCRHLA0A096LP55 91 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 FAM237BA0A1B0GVD1 139 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 MROH6A6NGR9 719 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 CAPN8A6NHC0 703 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 UPK3BL1B0FP48 263 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 UPK3BL2E5RIL1 263 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 DCXO43602 365 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 AP1G1O43747 822 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 PAPSS2O95340 614 aaPredicted RBP7.23□□□□□ -1.25
NUP54-204ENST00000506098 UQCRHP07919 91 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 GSTA2P09210 222 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 H2AFXP16104 143 aaPredicted RBP7.23□□□□□ -1.25
NUP54-204ENST00000506098 TSHRP16473 764 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 C5AR1P21730 350 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 NFKBIAP25963 317 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 MGAT1P26572 445 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 SLC8A1P32418 973 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 DRD3P35462 400 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 MAGEA4P43358 317 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 DGKEP52429 567 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 PDIA2Q13087 525 aaKnown RBP7.23□□□□□ -1.25
NUP54-204ENST00000506098 LAMB3Q13751 1172 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 FRG1Q14331 258 aaKnown RBP7.23□□□□□ -1.25
NUP54-204ENST00000506098 GALNT3Q14435 633 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 MAP9Q49MG5 647 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 CCDC38Q502W7 563 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 PCID2Q5JVF3 399 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 CERCAMQ5T4B2 595 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 STEAP4Q687X5 459 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 ZNF776Q68DI1 518 aaPredicted RBP7.23□□□□□ -1.25
NUP54-204ENST00000506098 Q6ZS52 159 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 TRIM67Q6ZTA4 783 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 CYS1Q717R9 158 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 PARS2Q7L3T8 475 aaKnown RBP7.23□□□□□ -1.25
NUP54-204ENST00000506098 KDELC2Q7Z4H8 507 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 TMC3Q7Z5M5 1100 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 TMEM135Q86UB9 458 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 MMAAQ8IVH4 418 aaKnown RBP7.23□□□□□ -1.25
NUP54-204ENST00000506098 CBARPQ8N350 705 aaPredicted RBP7.23□□□□□ -1.25
NUP54-204ENST00000506098 MPP5Q8N3R9 675 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 SPEM1Q8N4L4 309 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 MREGQ8N565 214 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 SLC25A41Q8N5S1 370 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 LSM14AQ8ND56 463 aaKnown RBP7.23□□□□□ -1.25
NUP54-204ENST00000506098 LPCAT1Q8NF37 534 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 MDGA1Q8NFP4 955 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 GRIN3AQ8TCU5 1115 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 PDCD6IPQ8WUM4 868 aaKnown RBP7.23□□□□□ -1.25
NUP54-204ENST00000506098 RAB7BQ96AH8 199 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 ARRDC3Q96B67 414 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 RMDN1Q96DB5 314 aa7.23□□□□□ -1.25
NUP54-204ENST00000506098 UHRF1Q96T88 793 aaPredicted RBP7.23□□□□□ -1.25
NUP54-204ENST00000506098 EBNA1BP2Q99848 306 aaKnown RBP7.23□□□□□ -1.25
NUP54-204ENST00000506098 WDR83Q9BRX9 315 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms