RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ASAH2Q9NR71 780 aa4.15□□□□□ -1.75
TOPBP1-204ENST00000505804 UTYO14607 1347 aa4.15□□□□□ -1.75
TOPBP1-204ENST00000505804 TDRD9Q8NDG6 1382 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 FAM237BA0A1B0GVD1 139 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 DYTNA2CJ06 578 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 HSPA12AO43301 675 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 NDUFB4O95168 129 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 CAPN3P20807 821 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 COMPP49747 757 aaPredicted RBP4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 HTR6P50406 440 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 OLR1P78380 273 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 CRYZQ08257 329 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 DSC1Q08554 894 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 NEDD9Q14511 834 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 CCNG2Q16589 344 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 MMEL1Q495T6 779 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 ANKRD54Q6NXT1 300 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 TSSK4Q6SA08 328 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 FBXL14Q8N1E6 418 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 ANKRD52Q8NB46 1076 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 SCCPDHQ8NBX0 429 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 BEST2Q8NFU1 509 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 ADAMTS15Q8TE58 950 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 SMARCE1Q969G3 411 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 MIB2Q96AX9 1013 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 TXNDC15Q96J42 360 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 WDFY2Q96P53 400 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 SLC25A33Q9BSK2 321 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 SCPEP1Q9HB40 452 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 FBXO9Q9UK97 447 aaPredicted RBP4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 RCOR1Q9UKL0 485 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 SLC45A1Q9Y2W3 748 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 AAR2Q9Y312 384 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 PAM16Q9Y3D7 125 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 KCNE2Q9Y6J6 123 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 CEPT1Q9Y6K0 416 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 ITIH6Q6UXX5 1313 aa4.14□□□□□ -1.75
TOPBP1-204ENST00000505804 FAM237AA0A1B0GTK4 181 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 PGPEP1LA6NFU8 196 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 INSIG1O15503 277 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 ZIC3O60481 467 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 PAGE4O60829 102 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 RNASEH2AO75792 299 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 BAIAP3O94812 1187 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 GLUD1P00367 558 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 SNHG28P0DPA3 235 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 IL7RP16871 459 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 CHMP24386 653 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 NFKBIAP25963 317 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 ITGB8P26012 769 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 CHATP28329 748 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 MAPK4P31152 587 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 BSGP35613 385 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 RXRGP48443 463 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 GLUD2P49448 558 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 FOXG1P55316 489 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 CEBPZQ03701 1054 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 TRAF3Q13114 568 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 FHL1Q13642 323 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 ERV3-1Q14264 604 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 DRAP1Q14919 205 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 MED22Q15528 200 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 CYP20A1Q6UW02 462 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 B3GNT6Q6ZMB0 384 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 QSOX2Q6ZRP7 698 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 CCDC129Q6ZRS4 1044 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 MTSS1LQ765P7 747 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 LINGO2Q7L985 606 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 GSTA5Q7RTV2 222 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 PXKQ7Z7A4 578 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 FJX1Q86VR8 437 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 NGEFQ8N5V2 710 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 TMEM116Q8NCL8 245 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 AGBL3Q8NEM8 1001 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 LRFN5Q96NI6 719 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 SLITRK1Q96PX8 696 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 MAP7D2Q96T17 732 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 FBRSL1Q9HCM7 1045 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 MKKSQ9NPJ1 570 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 GPR108Q9NPR9 543 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 DIAPH3Q9NSV4 1193 aa4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 CNOT8Q9UFF9 292 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 LIMA1Q9UHB6 759 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 AGO1Q9UL18 857 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-204ENST00000505804 PI4KAP2A4QPH2 592 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 TMEM202A6NGA9 273 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 F5H0A9 414 aaPredicted RBP4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 SERPINI2O75830 405 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 CH25HO95992 272 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 CYC1P08574 325 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 HOXB5P09067 269 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 ACAA1P09110 424 aaPredicted RBP4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 G6PDP11413 515 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 KRT10P13645 584 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 GPTP24298 496 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 PSMA4P25789 261 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 C21orf33P30042 268 aaPredicted RBP4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 HNRNPH1P31943 449 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 EIF2S3P41091 472 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms