RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 TMPRSS3P57727 454 aa24.83■■□□□ 1.57
HERC4-212ENST00000505760 POLR2LP62875 67 aaKnown RBP24.83■■□□□ 1.57
HERC4-212ENST00000505760 IL10RBQ08334 325 aa24.83■■□□□ 1.57
HERC4-212ENST00000505760 NSUN2Q08J23 767 aaKnown RBP eCLIP24.83■■□□□ 1.57
HERC4-212ENST00000505760 MTM1Q13496 603 aa24.83■■□□□ 1.57
HERC4-212ENST00000505760 RFTN1Q14699 578 aaPredicted RBP24.83■■□□□ 1.57
HERC4-212ENST00000505760 IGF2-ASQ6U949 168 aa24.83■■□□□ 1.57
HERC4-212ENST00000505760 ARHGAP36Q6ZRI8 547 aa24.83■■□□□ 1.57
HERC4-212ENST00000505760 ZNF571Q7Z3V5 609 aaPredicted RBP24.83■■□□□ 1.57
HERC4-212ENST00000505760 NPWQ8N729 165 aa24.83■■□□□ 1.57
HERC4-212ENST00000505760 KYQ8NBH2 561 aa24.83■■□□□ 1.57
HERC4-212ENST00000505760 ZNF653Q96CK0 615 aa24.83■■□□□ 1.57
HERC4-212ENST00000505760 SLC46A1Q96NT5 459 aa24.83■■□□□ 1.57
HERC4-212ENST00000505760 BPIFA3Q9BQP9 254 aa24.83■■□□□ 1.57
HERC4-212ENST00000505760 GPR34Q9UPC5 381 aa24.83■■□□□ 1.57
HERC4-212ENST00000505760 SCINQ9Y6U3 715 aa24.83■■□□□ 1.57
HERC4-212ENST00000505760 A0A1W2PNU3 283 aaPredicted RBP24.82■■□□□ 1.56
HERC4-212ENST00000505760 CFAP69A5D8W1 941 aa24.82■■□□□ 1.56
HERC4-212ENST00000505760 KLK10O43240 276 aa24.82■■□□□ 1.56
HERC4-212ENST00000505760 ELFN1P0C7U0 828 aa24.82■■□□□ 1.56
HERC4-212ENST00000505760 SCNN1BP51168 640 aa24.82■■□□□ 1.56
HERC4-212ENST00000505760 ZNF135P52742 658 aaPredicted RBP24.82■■□□□ 1.56
HERC4-212ENST00000505760 C19orf57Q0VDD7 668 aa24.82■■□□□ 1.56
HERC4-212ENST00000505760 LSM14AQ8ND56 463 aaKnown RBP24.82■■□□□ 1.56
HERC4-212ENST00000505760 WDR36Q8NI36 951 aaKnown RBP24.82■■□□□ 1.56
HERC4-212ENST00000505760 DPH1Q9BZG8 443 aa24.82■■□□□ 1.56
HERC4-212ENST00000505760 ZWILCHQ9H900 591 aa24.82■■□□□ 1.56
HERC4-212ENST00000505760 AIPL1Q9NZN9 384 aa24.82■■□□□ 1.56
HERC4-212ENST00000505760 PCDHGA8Q9Y5G5 932 aa24.82■■□□□ 1.56
HERC4-212ENST00000505760 CACNB4O00305 520 aaPredicted RBP24.81■■□□□ 1.56
HERC4-212ENST00000505760 CASC3O15234 703 aaKnown RBP24.81■■□□□ 1.56
HERC4-212ENST00000505760 LRCH4O75427 683 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 RECQL5O94762 991 aaPredicted RBP24.81■■□□□ 1.56
HERC4-212ENST00000505760 TNFP01375 233 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 HCAR3P49019 387 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 RENBPP51606 427 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 KLHL30Q0D2K2 578 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 CYP4V2Q6ZWL3 525 aaPredicted RBP24.81■■□□□ 1.56
HERC4-212ENST00000505760 ARL14Q8N4G2 192 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 LZTR1Q8N653 840 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 PLA2G15Q8NCC3 412 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 CCDC74AQ96AQ1 378 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 ECHDC3Q96DC8 303 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 TRIM11Q96F44 468 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 CPNE5Q9HCH3 593 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 CWC15Q9P013 229 aaKnown RBP24.81■■□□□ 1.56
HERC4-212ENST00000505760 TMEM63CQ9P1W3 806 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 MYO1AQ9UBC5 1043 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 SEPT3Q9UH03 358 aa24.81■■□□□ 1.56
HERC4-212ENST00000505760 PRKCIP41743 596 aa24.8■■□□□ 1.56
HERC4-212ENST00000505760 AP1S1P61966 158 aa24.8■■□□□ 1.56
HERC4-212ENST00000505760 RALGDSQ12967 914 aa24.8■■□□□ 1.56
HERC4-212ENST00000505760 DPYSQ14117 519 aa24.8■■□□□ 1.56
HERC4-212ENST00000505760 E4F1Q66K89 784 aaPredicted RBP24.8■■□□□ 1.56
HERC4-212ENST00000505760 LIPIQ6XZB0 460 aa24.8■■□□□ 1.56
HERC4-212ENST00000505760 NYAP1Q6ZVC0 841 aa24.8■■□□□ 1.56
HERC4-212ENST00000505760 PDXPQ96GD0 296 aa24.8■■□□□ 1.56
HERC4-212ENST00000505760 MRPL47Q9HD33 250 aaKnown RBP24.8■■□□□ 1.56
HERC4-212ENST00000505760 DGKBQ9Y6T7 804 aa24.8■■□□□ 1.56
HERC4-212ENST00000505760 CCDC187A0A096LP49 1063 aa24.79■■□□□ 1.56
HERC4-212ENST00000505760 A0A1W2PQC6 194 aa24.79■■□□□ 1.56
HERC4-212ENST00000505760 A8MX80 341 aa24.79■■□□□ 1.56
HERC4-212ENST00000505760 DDX3XO00571 662 aaKnown RBP eCLIP24.79■■□□□ 1.56
HERC4-212ENST00000505760 NTN3O00634 580 aaPredicted RBP24.79■■□□□ 1.56
HERC4-212ENST00000505760 MYBL1P10243 752 aa24.79■■□□□ 1.56
HERC4-212ENST00000505760 KELP23276 732 aa24.79■■□□□ 1.56
HERC4-212ENST00000505760 KIAA1024LP59773 190 aa24.79■■□□□ 1.56
HERC4-212ENST00000505760 LBRQ14739 615 aaKnown RBP24.79■■□□□ 1.56
HERC4-212ENST00000505760 ARHGAP40Q5TG30 622 aa24.79■■□□□ 1.56
HERC4-212ENST00000505760 TMCO4Q5TGY1 634 aa24.79■■□□□ 1.56
HERC4-212ENST00000505760 DPPA4Q7L190 304 aa24.79■■□□□ 1.56
HERC4-212ENST00000505760 OR6C4Q8NGE1 309 aa24.79■■□□□ 1.56
HERC4-212ENST00000505760 OR56A4Q8NGH8 313 aa24.79■■□□□ 1.56
HERC4-212ENST00000505760 FUBP1Q96AE4 644 aaKnown RBP24.79■■□□□ 1.56
HERC4-212ENST00000505760 CCDC97Q96F63 343 aaPredicted RBP24.79■■□□□ 1.56
HERC4-212ENST00000505760 PRR11Q96HE9 360 aaPredicted RBP24.79■■□□□ 1.56
HERC4-212ENST00000505760 ZNF599Q96NL3 588 aa24.79■■□□□ 1.56
HERC4-212ENST00000505760 PSKH2Q96QS6 385 aa24.79■■□□□ 1.56
HERC4-212ENST00000505760 GFM1Q96RP9 751 aaKnown RBP24.79■■□□□ 1.56
HERC4-212ENST00000505760 RBM15Q96T37 977 aaKnown RBP eCLIP24.79■■□□□ 1.56
HERC4-212ENST00000505760 HELZ2Q9BYK8 2649 aaKnown RBP24.78■■□□□ 1.56
HERC4-212ENST00000505760 PMS2P1A4D2B8 440 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 TMEM202A6NGA9 273 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 H3BRJ5 948 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 TRAFD1O14545 582 aaPredicted RBP24.78■■□□□ 1.56
HERC4-212ENST00000505760 TNFSF15O95150 251 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 SKILP12757 684 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 PCK1P35558 622 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 ARL4AP40617 200 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 PDX1P52945 283 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 SLC10A7Q0GE19 358 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 ZNF235Q14590 738 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 ACOX1Q15067 660 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 TAF8Q7Z7C8 310 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 TP53INP2Q8IXH6 220 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 OR1E3Q8WZA6 343 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 RABGEF1Q9UJ41 708 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 UNC13CQ8NB66 2214 aa24.78■■□□□ 1.56
HERC4-212ENST00000505760 CFAP46Q8IYW2 2715 aa24.77■■□□□ 1.56
HERC4-212ENST00000505760 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms