RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 GOLGA8KD6RF30 607 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 SPECC1L-ADORA2AF8WAN1 911 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 GAPDHSO14556 408 aaPredicted RBP10.44□□□□□ -0.74
TPM3-217ENST00000504663 NARSO43776 548 aaKnown RBP10.44□□□□□ -0.74
TPM3-217ENST00000504663 OPA1O60313 960 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 CDH16O75309 829 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 TRBC1P01850 177 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 POLBP06746 335 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 ASGR2P07307 311 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 ALPIP09923 528 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 ERVK-10P10266 1014 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 HLA-EP13747 358 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 HNRNPLP14866 589 aaKnown RBP eCLIP10.44□□□□□ -0.74
TPM3-217ENST00000504663 IL9P15248 144 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 GABRB3P28472 473 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 CTHP32929 405 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 KIR2DL1P43626 348 aaPredicted RBP10.44□□□□□ -0.74
TPM3-217ENST00000504663 GRIA4P48058 902 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 CSRP3P50461 194 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 METAP1P53582 386 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 RPL26P61254 145 aaKnown RBP10.44□□□□□ -0.74
TPM3-217ENST00000504663 CNGA3Q16281 694 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 HNRNPA1L2Q32P51 320 aaKnown RBP10.44□□□□□ -0.74
TPM3-217ENST00000504663 TMEM259Q4ZIN3 620 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 C2orf27AQ580R0 203 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 HABP4Q5JVS0 413 aaKnown RBP10.44□□□□□ -0.74
TPM3-217ENST00000504663 C9orf64Q5T6V5 341 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 TEDDM1Q5T9Z0 273 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 KCTD16Q68DU8 428 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 FSTL4Q6MZW2 842 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 CASC4Q6P4E1 433 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 MTERF4Q7Z6M4 381 aaKnown RBP10.44□□□□□ -0.74
TPM3-217ENST00000504663 SLC44A3Q8N4M1 653 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 DEFB123Q8N688 67 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 BRSK1Q8TDC3 778 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 GLMNQ92990 594 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 ACBD3Q9H3P7 528 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 BRD9Q9H8M2 597 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 ZDHHC4Q9NPG8 344 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 PRDM6Q9NQX0 595 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 HAUS2Q9NVX0 235 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.44□□□□□ -0.74
TPM3-217ENST00000504663 PSMC3IPQ9P2W1 217 aaPredicted RBP10.44□□□□□ -0.74
TPM3-217ENST00000504663 ZNF180Q9UJW8 692 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 RPL26L1Q9UNX3 145 aaKnown RBP10.44□□□□□ -0.74
TPM3-217ENST00000504663 ZNF711Q9Y462 761 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 PCDHB9Q9Y5E1 797 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 MYO10Q9HD67 2058 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 CAPN8A6NHC0 703 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 NPIPB15A6NHN6 443 aaPredicted RBP10.43□□□□□ -0.74
TPM3-217ENST00000504663 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.43□□□□□ -0.74
TPM3-217ENST00000504663 LOC730098B7Z3J9 87 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 POC1B-GALNT4F8VUJ3 575 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 CCL22O00626 93 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 BUD23O43709 281 aaKnown RBP10.43□□□□□ -0.74
TPM3-217ENST00000504663 POP4O95707 220 aaKnown RBP10.43□□□□□ -0.74
TPM3-217ENST00000504663 UGT2B4P06133 528 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 ATP5BP06576 529 aaKnown RBP10.43□□□□□ -0.74
TPM3-217ENST00000504663 IVLP07476 585 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 MYZAPP0CAP1 466 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 C7P10643 843 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 LHCGRP22888 699 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 CA5AP35218 305 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 GRIA2P42262 883 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 GALK1P51570 392 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 BCL2L1Q07817 233 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 MGAT5Q09328 741 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 IFFO1Q0D2I5 559 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 NR1H3Q13133 447 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 NAB1Q13506 487 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 SEMA3AQ14563 771 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 TAF1AQ15573 450 aaPredicted RBP10.43□□□□□ -0.74
TPM3-217ENST00000504663 ARMC12Q5T9G4 340 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 EMC10Q5UCC4 262 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 PACS1Q6VY07 963 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 TRABD2AQ86V40 505 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 EXOC3L1Q86VI1 746 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 KCNMB4Q86W47 210 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 PNPLA1Q8N8W4 532 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 BLOC1S5Q8TDH9 187 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 DNASE1L2Q92874 299 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 PEX13Q92968 403 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 HLA-CQ95604 372 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 ISL2Q96A47 359 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 ARRDC3Q96B67 414 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 DNAJC1Q96KC8 554 aaKnown RBP10.43□□□□□ -0.74
TPM3-217ENST00000504663 RUFY1Q96T51 708 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 FAM129BQ96TA1 746 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 AGAP2Q99490 1192 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 HEPHQ9BQS7 1158 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 SUV39H2Q9H5I1 410 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 ZDHHC6Q9H6R6 413 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 ATP13A3Q9H7F0 1226 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 PPCSQ9HAB8 311 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 NLE1Q9NVX2 485 aaPredicted RBP10.43□□□□□ -0.74
TPM3-217ENST00000504663 POLR3BQ9NW08 1133 aaPredicted RBP10.43□□□□□ -0.74
TPM3-217ENST00000504663 OGFRQ9NZT2 677 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 SAMD15Q9P1V8 674 aa10.43□□□□□ -0.74
TPM3-217ENST00000504663 MARCH4Q9P2E8 410 aaPredicted RBP10.43□□□□□ -0.74
TPM3-217ENST00000504663 LIMD1Q9UGP4 676 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms