RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 GMPPBQ9Y5P6 360 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 PIRTP0C851 137 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 COL6A2P12110 1019 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 NR1H2P55055 460 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 MAPK11Q15759 364 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 TEX44Q53QW1 395 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 GJC2Q5T442 439 aaPredicted RBP16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 NAIF1Q69YI7 327 aaPredicted RBP16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 R3HCC1LQ7Z5L2 792 aaKnown RBP16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 FAM20CQ8IXL6 584 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 DEPDC4Q8N2C3 294 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 COPS8Q99627 209 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 FGFBP2Q9BYJ0 223 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 POLR1DQ9Y2S0 133 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 XRN1Q8IZH2 1706 aaKnown RBP16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 HOXB6P17509 224 aaKnown RBP16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 TSPAN8P19075 237 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 EPORP19235 508 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 MC4RP32245 332 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 PRKAG1P54619 331 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 SPESP1Q6UW49 350 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 MON1BQ7L1V2 547 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 ZC3H7AQ8IWR0 971 aaKnown RBP16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 SFRP1Q8N474 314 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 BSNDQ8WZ55 320 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 NIFKQ9BYG3 293 aaKnown RBP16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 BBIP1A8MTZ0 92 aa16.58■□□□□ 0.25
PCDHA1-203ENST00000504120 LYPLA1O75608 230 aaPredicted RBP16.58■□□□□ 0.25
PCDHA1-203ENST00000504120 CTSEP14091 401 aa16.58■□□□□ 0.25
PCDHA1-203ENST00000504120 PTP4A2Q12974 167 aa16.58■□□□□ 0.25
PCDHA1-203ENST00000504120 DGCR6Q14129 220 aa16.58■□□□□ 0.25
PCDHA1-203ENST00000504120 TAB1Q15750 504 aa16.58■□□□□ 0.25
PCDHA1-203ENST00000504120 COLGALT2Q8IYK4 626 aa16.58■□□□□ 0.25
PCDHA1-203ENST00000504120 TMEM199Q8N511 208 aa16.58■□□□□ 0.25
PCDHA1-203ENST00000504120 SPPL2BQ8TCT7 592 aa16.58■□□□□ 0.25
PCDHA1-203ENST00000504120 TCF12Q99081 682 aa16.58■□□□□ 0.25
PCDHA1-203ENST00000504120 CLN6Q9NWW5 311 aa16.58■□□□□ 0.25
PCDHA1-203ENST00000504120 KCNE2Q9Y6J6 123 aa16.58■□□□□ 0.25
PCDHA1-203ENST00000504120 OR6A2O95222 327 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 PPM1AP35813 382 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 PTSQ03393 145 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 DCTN2Q13561 401 aaKnown RBP16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 DGKZQ13574 1117 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 TREML2Q5T2D2 321 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 SDHAF4Q5VUM1 108 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 SPATA6LQ8N4H0 392 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 CAMKK1Q8N5S9 505 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 BPIFB6Q8NFQ5 453 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 NKD2Q969F2 451 aaPredicted RBP16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 MYDGFQ969H8 173 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 ITCHQ96J02 903 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 RTKNQ9BST9 563 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 FANCEQ9HB96 536 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 SLC17A7Q9P2U7 560 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 PCDHGC3Q9UN70 934 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 MRPS23Q9Y3D9 190 aaKnown RBP16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 ASGR1P07306 291 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 SP3Q02447 781 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 SERPINA13PQ6UXR4 307 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 PTF1AQ7RTS3 328 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 PROSER1Q86XN7 944 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 OR52L1Q8NGH7 329 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 REXO5Q96IC2 774 aaKnown RBP16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 MECRQ9BV79 373 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 OSBPL11Q9BXB4 747 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 PLLPQ9Y342 182 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 DHRS12A0PJE2 317 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 NOL4O94818 638 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 ENO2P09104 434 aaPredicted RBP16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 LINC00032P0C843 101 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 XIAPP98170 497 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 SPIRE1Q08AE8 756 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 CMC1Q7Z7K0 106 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 MOSPD2Q8NHP6 518 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 PTCD2Q8WV60 388 aaKnown RBP16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 EXOC2Q96KP1 924 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 BTN2A3PQ96KV6 586 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 PCDH12Q9NPG4 1184 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 NRXN3Q9Y4C0 1643 aa16.58■□□□□ 0.24
PCDHA1-203ENST00000504120 SMIM28A0A1B0GU29 152 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 TSC22D2O75157 780 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 BRCC3P46736 316 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 TRPM4Q8TD43 1214 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 HEXDCQ8WVB3 486 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 IGFLR1Q9H665 355 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 BRD9Q9H8M2 597 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 PNPOQ9NVS9 261 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 CHKBQ9Y259 395 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 TRAF6Q9Y4K3 522 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 CLDN11O75508 207 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 PPIBP23284 216 aaKnown RBP16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 HTR7P34969 479 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 MAPK10P53779 464 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 TCEA2Q15560 299 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 HSDL1Q3SXM5 330 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 ANXA8L1Q5VT79 327 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 VSTM1Q6UX27 236 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 OR7A2PQ8NGA2 310 aa16.57■□□□□ 0.24
PCDHA1-203ENST00000504120 PPP1R14AQ96A00 147 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms