RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CYP4V2Q6ZWL3 525 aaPredicted RBP12.03□□□□□ -0.48
MED28-203ENST00000503945 LRRC49Q8IUZ0 686 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 HID1Q8IV36 788 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 PHACTR4Q8IZ21 702 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 SDR16C5Q8N3Y7 309 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 NPWQ8N729 165 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 SNIP1Q8TAD8 396 aaKnown RBP12.03□□□□□ -0.48
MED28-203ENST00000503945 IFI44Q8TCB0 444 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 MAPK15Q8TD08 544 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 TEKT4Q8WW24 435 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 TBATAQ96M53 351 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 FCRL3Q96P31 734 aaPredicted RBP12.03□□□□□ -0.48
MED28-203ENST00000503945 APOOQ9BUR5 198 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 CAAP1Q9H8G2 361 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.03□□□□□ -0.48
MED28-203ENST00000503945 APOBEC3BQ9UH17 382 aaKnown RBP12.03□□□□□ -0.48
MED28-203ENST00000503945 ANAPC7Q9UJX3 599 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 SETXQ7Z333 2677 aaKnown RBP12.03□□□□□ -0.48
MED28-203ENST00000503945 A8MX80 341 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 TNFP01375 233 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 ALPIP09923 528 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 TSHRP16473 764 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 CASP14P31944 242 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 SERPINB6P35237 376 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 ACTN2P35609 894 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 IGFALSP35858 605 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 HK3P52790 923 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 SRP54P61011 504 aaKnown RBP12.02□□□□□ -0.49
MED28-203ENST00000503945 CCDC173Q0VFZ6 552 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 ZNF235Q14590 738 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 IRF4Q15306 451 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 MARC1Q5VT66 337 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 MAP7D3Q8IWC1 876 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 TP53INP2Q8IXH6 220 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 LSMEM2Q8N112 164 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 FSTL5Q8N475 847 aaPredicted RBP12.02□□□□□ -0.49
MED28-203ENST00000503945 NIPA2Q8N8Q9 360 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 KCTD6Q8NC69 237 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 TSACCQ96A04 125 aaPredicted RBP12.02□□□□□ -0.49
MED28-203ENST00000503945 GRAMD1AQ96CP6 724 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 ECHDC3Q96DC8 303 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 BTBD6Q96KE9 485 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 CSPG4P5Q96PW8 444 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 DEPDC7Q96QD5 511 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 ZNHIT6Q9NWK9 470 aaKnown RBP12.02□□□□□ -0.49
MED28-203ENST00000503945 GULP1Q9UBP9 304 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 PCDHGC4Q9Y5F7 938 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 TRPM6Q9BX84 2022 aa12.02□□□□□ -0.49
MED28-203ENST00000503945 TTC24A2A3L6 582 aaPredicted RBP12.01□□□□□ -0.49
MED28-203ENST00000503945 EME2A4GXA9 379 aaPredicted RBP12.01□□□□□ -0.49
MED28-203ENST00000503945 PDE2AO00408 941 aaPredicted RBP12.01□□□□□ -0.49
MED28-203ENST00000503945 TRAFD1O14545 582 aaPredicted RBP12.01□□□□□ -0.49
MED28-203ENST00000503945 MUSKO15146 869 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 MAFKO60675 156 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 USP12O75317 370 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 RECQL5O94762 991 aaPredicted RBP12.01□□□□□ -0.49
MED28-203ENST00000503945 RASGRP1O95267 797 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 PRKCGP05129 697 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 H2AFZP0C0S5 128 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 ELFN1P0C7U0 828 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 KRT10P13645 584 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 TCF4P15884 667 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 MMP12P39900 470 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 CDH6P55285 790 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 ITKQ08881 620 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 MTM1Q13496 603 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 NFATC4Q14934 902 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 ACOX1Q15067 660 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 TBC1D25Q3MII6 688 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 ZSCAN23Q3MJ62 389 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 RALGPS1Q5JS13 557 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 CDCP2Q5VXM1 449 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 PCSK4Q6UW60 755 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 LIPIQ6XZB0 460 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 H2AFVQ71UI9 128 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 EFL1Q7Z2Z2 1120 aaKnown RBP12.01□□□□□ -0.49
MED28-203ENST00000503945 GPR155Q7Z3F1 870 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 ZSWIM9Q86XI8 627 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 GKN2Q86XP6 184 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 RBFAQ8N0V3 343 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 NDUFAF2Q8N183 169 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 ATPAF2Q8N5M1 289 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 LSM14AQ8ND56 463 aaKnown RBP12.01□□□□□ -0.49
MED28-203ENST00000503945 OR8K1Q8NGG5 319 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 PDCD6IPQ8WUM4 868 aaKnown RBP12.01□□□□□ -0.49
MED28-203ENST00000503945 NUDCD1Q96RS6 583 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 BOCQ9BWV1 1114 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 TCEAL2Q9H3H9 227 aaPredicted RBP12.01□□□□□ -0.49
MED28-203ENST00000503945 NOD2Q9HC29 1040 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 PCDH18Q9HCL0 1135 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 ETNK2Q9NVF9 386 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 KCTD5Q9NXV2 234 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 CTTNBP2NLQ9P2B4 639 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 RCOR3Q9P2K3 495 aaPredicted RBP12.01□□□□□ -0.49
MED28-203ENST00000503945 LCMT1Q9UIC8 334 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 PADI4Q9UM07 663 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 PHTF1Q9UMS5 762 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 OR1A2Q9Y585 309 aa12.01□□□□□ -0.49
MED28-203ENST00000503945 LY6G6EA0A0G2JKS1 128 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms